RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 RCSD1Q6JBY9 416 aa17.84■□□□□ 0.45
SVOP-203ENST00000550436 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
SVOP-203ENST00000550436 ALDH8A1Q9H2A2 487 aaPredicted RBP17.84■□□□□ 0.45
SVOP-203ENST00000550436 MTIF3Q9H2K0 278 aaKnown RBP17.84■□□□□ 0.45
SVOP-203ENST00000550436 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
SVOP-203ENST00000550436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
SVOP-203ENST00000550436 EPOPA6NHQ4 379 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 ZFYP08048 801 aaPredicted RBP17.83■□□□□ 0.44
SVOP-203ENST00000550436 FDX1P10109 184 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 BMP1P13497 986 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 SLC16A2P36021 539 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 KCNQ1P51787 676 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 PDE4BQ07343 736 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 AAMPQ13685 434 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 BAATQ14032 418 aaPredicted RBP17.83■□□□□ 0.44
SVOP-203ENST00000550436 TKFCQ3LXA3 575 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 NAPBQ9H115 298 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 CCPG1Q9ULG6 757 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 STX8Q9UNK0 236 aa17.83■□□□□ 0.44
SVOP-203ENST00000550436 TRIP12Q14669 1992 aaPredicted RBP17.82■□□□□ 0.44
SVOP-203ENST00000550436 ATP2A2P16615 1042 aaKnown RBP17.82■□□□□ 0.44
SVOP-203ENST00000550436 SPRED2Q7Z698 418 aa17.82■□□□□ 0.44
SVOP-203ENST00000550436 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
SVOP-203ENST00000550436 BRWD1Q9NSI6 2320 aa17.82■□□□□ 0.44
SVOP-203ENST00000550436 TNKSO95271 1327 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 NFIBO00712 420 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 ZEB2O60315 1214 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 PLA2G6O60733 806 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 CA3P07451 260 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 MYL3P08590 195 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 ANKRD45Q5TZF3 282 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 RPUSD2Q8IZ73 545 aaKnown RBP17.81■□□□□ 0.44
SVOP-203ENST00000550436 PI4K2BQ8TCG2 481 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 MORC4Q8TE76 937 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 NACAP1Q9BZK3 213 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 VTA1Q9NP79 307 aa17.81■□□□□ 0.44
SVOP-203ENST00000550436 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
SVOP-203ENST00000550436 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 COPS5Q92905 334 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 FSD1Q9BTV5 496 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 Q9Y3F1 56 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 MTCH2Q9Y6C9 303 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 TRANK1O15050 2925 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 PTPRSQ13332 1948 aa17.8■□□□□ 0.44
SVOP-203ENST00000550436 FRMPD2Q68DX3 1309 aaPredicted RBP17.79■□□□□ 0.44
SVOP-203ENST00000550436 TSPY2A6NKD2 308 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 IGHDP01880 384 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 ICAM1P05362 532 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
SVOP-203ENST00000550436 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
SVOP-203ENST00000550436 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 IL27Q8NEV9 243 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 GPCPD1Q9NPB8 672 aa17.79■□□□□ 0.44
SVOP-203ENST00000550436 ZBTB47Q9UFB7 747 aaPredicted RBP17.79■□□□□ 0.44
SVOP-203ENST00000550436 RANBP6O60518 1105 aaKnown RBP17.78■□□□□ 0.44
SVOP-203ENST00000550436 SLC3A2P08195 630 aaKnown RBP17.78■□□□□ 0.44
SVOP-203ENST00000550436 NBPF20Q3BBV1 942 aa17.78■□□□□ 0.44
SVOP-203ENST00000550436 FAM47CQ5HY64 1035 aa17.78■□□□□ 0.44
SVOP-203ENST00000550436 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
SVOP-203ENST00000550436 RANBP17Q9H2T7 1088 aaKnown RBP17.78■□□□□ 0.44
SVOP-203ENST00000550436 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
SVOP-203ENST00000550436 TTC41PQ6P2S7 1318 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
SVOP-203ENST00000550436 PTPDC1A2A3K4 754 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 MX1P20591 662 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 CALML3P27482 149 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 OR6J1Q8NGC5 347 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 CLEC4DQ8WXI8 215 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 EPHX3Q9H6B9 360 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 POLR3EQ9NVU0 708 aa17.77■□□□□ 0.44
SVOP-203ENST00000550436 SALL3Q9BXA9 1300 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 NOVP48745 357 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 TAP1Q03518 808 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 SYDE2Q5VT97 1194 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 TMCO2Q7Z6W1 182 aaPredicted RBP17.76■□□□□ 0.43
SVOP-203ENST00000550436 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 ARNTL2Q8WYA1 636 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
SVOP-203ENST00000550436 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
SVOP-203ENST00000550436 TSPYL2Q9H2G4 693 aaPredicted RBP17.76■□□□□ 0.43
SVOP-203ENST00000550436 TANC1Q9C0D5 1861 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 ERC2O15083 957 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 TMEM47Q9BQJ4 181 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
SVOP-203ENST00000550436 ADD3Q9UEY8 706 aaKnown RBP17.75■□□□□ 0.43
SVOP-203ENST00000550436 ARIH2O95376 493 aa17.74■□□□□ 0.43
SVOP-203ENST00000550436 SUPT20HL2P0C7V6 817 aa17.74■□□□□ 0.43
SVOP-203ENST00000550436 PLA2G5P39877 138 aa17.74■□□□□ 0.43
SVOP-203ENST00000550436 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms