RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 MTMR9Q96QG7 549 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 MED15Q96RN5 788 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TSG101Q99816 390 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TRIM9Q9C026 710 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 PSTPIP2Q9H939 334 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 JMJD4Q9H9V9 463 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 COL2A1P02458 1487 aaPredicted RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 ABCB11O95342 1321 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 CASP1P29466 404 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 SLC1A4P43007 532 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 TNNI2P48788 182 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 SCNN1DP51172 638 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 ATP2B2Q01814 1243 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 LRRC63Q05C16 580 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 CERKLQ49MI3 558 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 ARHGAP29Q52LW3 1261 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 UNC13DQ70J99 1090 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 SMYD4Q8IYR2 804 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 TXLNBQ8N3L3 684 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 MB21D1Q8N884 522 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 OR8K1Q8NGG5 319 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 MTMR8Q96EF0 704 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 MTRQ99707 1265 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 DDX4Q9NQI0 724 aaKnown RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 TAB2Q9NYJ8 693 aa10.01□□□□□ -0.81
TMEM116-209ENST00000550020 ZNF215Q9UL58 517 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 LUC7L2Q9Y383 392 aaKnown RBP10.01□□□□□ -0.81
TMEM116-209ENST00000550020 FOCADQ5VW36 1801 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 MYH1P12882 1939 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 PP2D1A8MPX8 630 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 TBX3O15119 743 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 TEX33O43247 280 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 KLRC4O43908 158 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 ECE2O60344 883 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 CASP14P31944 242 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 CCT6AP40227 531 aaKnown RBP10□□□□□ -0.81
TMEM116-209ENST00000550020 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
TMEM116-209ENST00000550020 KRT83P78385 493 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 ARHGAP27Q6ZUM4 889 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 RASGRP2Q7LDG7 609 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 CCDC84Q86UT8 332 aaPredicted RBP10□□□□□ -0.81
TMEM116-209ENST00000550020 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 GMCL1P1Q8NEA9 526 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 ERMNQ8TAM6 284 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 CPLX3Q8WVH0 158 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 LARP4BQ92615 738 aaKnown RBP10□□□□□ -0.81
TMEM116-209ENST00000550020 COA7Q96BR5 231 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 GMCL1Q96IK5 515 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 AMNQ9BXJ7 453 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 VPS16Q9H269 839 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 DDX25Q9UHL0 483 aaKnown RBP10□□□□□ -0.81
TMEM116-209ENST00000550020 GDAQ9Y2T3 454 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 ADGRG1Q9Y653 693 aa10□□□□□ -0.81
TMEM116-209ENST00000550020 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 ADAMTS3O15072 1205 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 GYPCP04921 128 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 TUBBP07437 444 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CDC25AP30304 524 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 KRT9P35527 623 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 MTIF2P46199 727 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 EIF6P56537 245 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 ICA1Q05084 483 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 ABCB5Q2M3G0 1257 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 FIGNQ5HY92 759 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 DACT2Q5SW24 774 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 RBM26Q5T8P6 1007 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 HAUS3Q68CZ6 603 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 SLFN13Q68D06 897 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 TTI2Q6NXR4 508 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 GUF1Q8N442 669 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 RAD54LQ92698 747 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 TUBGCP2Q9BSJ2 902 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 VPS33BQ9H267 617 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CPVLQ9H3G5 476 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 EHMT1Q9H9B1 1298 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
TMEM116-209ENST00000550020 HDAC9Q9UKV0 1011 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CAPN11Q9UMQ6 739 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 PCDHA12Q9UN75 941 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 ATRNL1Q5VV63 1379 aa9.99□□□□□ -0.81
TMEM116-209ENST00000550020 CYP3A7-CYP3A51PA0A087WV96 503 aa9.98□□□□□ -0.81
TMEM116-209ENST00000550020 A0A1W2PQJ5 194 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms