RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 GBP3Q9H0R5 595 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 CLEC4MQ9H2X3 399 aaPredicted RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ACBD3Q9H3P7 528 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 LIN7BQ9HAP6 207 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 CYP4F12Q9HCS2 524 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 IL1RAPL2Q9NP60 686 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ARFGAP3Q9NP61 516 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 BIN2Q9UBW5 565 aaPredicted RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 USP16Q9Y5T5 823 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 MAP3K19Q56UN5 1328 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 PLEKHG2Q9H7P9 1386 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 KDM3BQ7LBC6 1761 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 CARNS1A5YM72 827 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 GNAT3A8MTJ3 354 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 VGLL3A8MV65 326 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 MYO1CO00159 1063 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 PFKFB2O60825 505 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 ERLIN1O75477 346 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 SMC2O95347 1197 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TBC1D8O95759 1140 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 IFIT2P09913 472 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 ACTN2P35609 894 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 MAGEA9P43362 315 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 EVCP57679 992 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 NLRP12P59046 1061 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 OS9Q13438 667 aaPredicted RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TOB2Q14106 344 aaPredicted RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 SMC1AQ14683 1233 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 CPSF6Q16630 551 aaKnown RBP eCLIP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 MTHFSDQ2M296 383 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 PRSS36Q5K4E3 855 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 ICE2Q659A1 982 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 ADALQ6DHV7 355 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 CC2D1AQ6P1N0 951 aaPredicted RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TXNDC11Q6PKC3 985 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 NBPF11Q86T75 865 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 SRLQ86TD4 932 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 HOMER1Q86YM7 354 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 NECAB1Q8N987 351 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 FSIP1Q8NA03 581 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC191Q8NCU4 936 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 GALNT11Q8NCW6 608 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 DNAAF4Q8WXU2 420 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 SLC7A3Q8WY07 619 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 GOLGA1Q92805 767 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 UTP4Q969X6 686 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 MEGF10Q96KG7 1140 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 UTP14AQ9BVJ6 771 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TRAIPQ9BWF2 469 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 CARD10Q9BWT7 1032 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 EHD4Q9H223 541 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 SUGCTQ9HAC7 445 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 NLRP2Q9NX02 1062 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TRMT1Q9NXH9 659 aaKnown RBP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.34□□□□□ -1.71
RAB5B-207ENST00000549915 RAXQ9Y2V3 346 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 MAP3K15Q6ZN16 1313 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 PLEKHG1Q9ULL1 1385 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 TSPOAP1O95153 1857 aa4.34□□□□□ -1.71
RAB5B-207ENST00000549915 UNC79Q9P2D8 2635 aa4.34□□□□□ -1.72
RAB5B-207ENST00000549915 NWD1Q149M9 1564 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ANKARQ7Z5J8 1434 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 COL15A1P39059 1388 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 CEMIPQ8WUJ3 1361 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 UTYO14607 1347 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 SALL1Q9NSC2 1324 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 A0A096LPE4 126 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 A0A1W2PP55 124 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 SCO2A0A1W2PP80 73 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 A0A1W2PPZ6 126 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 MAP2K7O14733 419 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 GAS2O43903 313 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 CPP00450 1065 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ESRRAP11474 423 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 CPA1P15085 419 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 NOP2P46087 812 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 PPP2R3AQ06190 1150 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 NMIQ13287 307 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 AP3B2Q13367 1082 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TAF7Q15545 349 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TTC31Q49AM3 519 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 BEND3Q5T5X7 828 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 GORABQ5T7V8 394 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 PEAR1Q5VY43 1037 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ARMCX5Q6P1M9 558 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TRIM65Q6PJ69 517 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 KRBA2Q6ZNG9 492 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 RSRC2Q7L4I2 434 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TMC6Q7Z403 805 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 BRAPQ7Z569 592 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 VN1R5Q7Z5H4 357 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 TEX2Q8IWB9 1127 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 SUGP1Q8IWZ8 645 aaKnown RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 ELOA2Q8IYF1 753 aaPredicted RBP4.33□□□□□ -1.72
RAB5B-207ENST00000549915 FBXL16Q8N461 479 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 CEP112Q8N8E3 955 aa4.33□□□□□ -1.72
RAB5B-207ENST00000549915 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms