RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NR1I3Q14994 352 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 CLEC10AQ8IUN9 316 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 NOA1Q8NC60 698 aaKnown RBP12.44□□□□□ -0.42
LINC00661-204ENST00000549354 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-204ENST00000549354 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 SCG2P13521 617 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 ZNF18P17022 549 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 KCNA3P22001 575 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 KRT9P35527 623 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 KCNJ6P48051 423 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 MORC3Q14149 939 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 ENOX1Q8TC92 643 aaKnown RBP12.44□□□□□ -0.42
LINC00661-204ENST00000549354 PSMD1Q99460 953 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 IDI2Q9BXS1 227 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-204ENST00000549354 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
LINC00661-204ENST00000549354 G3V3G9 751 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
LINC00661-204ENST00000549354 CXCR5P32302 372 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 VSNL1P62760 191 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
LINC00661-204ENST00000549354 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
LINC00661-204ENST00000549354 IDEP14735 1019 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 KRT2P35908 639 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 INF2Q27J81 1249 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 SLC35G1Q2M3R5 365 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-204ENST00000549354 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 RABGGTAQ92696 567 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
LINC00661-204ENST00000549354 TPM1P09493 284 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
LINC00661-204ENST00000549354 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-204ENST00000549354 ANKZF1Q9H8Y5 726 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-204ENST00000549354 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00661-204ENST00000549354 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 DNAAF5Q86Y56 855 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 SPZ1Q9BXG8 430 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 DACH1Q9UI36 760 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 DUSP10Q9Y6W6 482 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 CTAGE9A4FU28 777 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 GYPCP04921 128 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 SCNN1DP51172 638 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 LETM2Q2VYF4 491 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 FILIP1LQ4L180 1135 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 PAGE5Q96GU1 130 aa12.42□□□□□ -0.42
LINC00661-204ENST00000549354 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-204ENST00000549354 AOC3Q16853 763 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 TXLNBQ8N3L3 684 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
LINC00661-204ENST00000549354 RSPH14Q9UHP6 348 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 DAGLBQ8NCG7 672 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 TRIM47Q96LD4 638 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 MTMR4Q9NYA4 1195 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 CDC23Q9UJX2 597 aa12.41□□□□□ -0.42
LINC00661-204ENST00000549354 GOLGA6L9A6NEM1 432 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 YDJCA8MPS7 323 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 M0R2N6 131 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 CYTH3O43739 400 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 TUBB4AP04350 444 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 SHMT1P34896 483 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 STAT6P42226 847 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
LINC00661-204ENST00000549354 TANGO6Q9C0B7 1094 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
LINC00661-204ENST00000549354 JADE2Q9NQC1 790 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 CEP131Q9UPN4 1083 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
LINC00661-204ENST00000549354 A0A1B0GTH6 734 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 ZNF185O15231 689 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 ERVK-24P63145 666 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 PICALMQ13492 652 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 GALNT17Q6IS24 598 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
LINC00661-204ENST00000549354 MARCH6O60337 910 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 MFAP3LO75121 409 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 BMP15O95972 392 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 CALML3P27482 149 aa12.4□□□□□ -0.42
LINC00661-204ENST00000549354 SARSP49591 514 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms