RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 RAB27AP51159 221 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 ID3Q02535 119 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 ITKQ08881 620 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 RRS1Q15050 365 aaKnown RBP4.85□□□□□ -1.63
APAF1-208ENST00000549007 NSMFQ6X4W1 530 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 DYMQ7RTS9 669 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 OSBP2Q969R2 916 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 NOL6Q9H6R4 1146 aaKnown RBP4.85□□□□□ -1.63
APAF1-208ENST00000549007 MON2Q7Z3U7 1717 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 SBNO1A3KN83 1393 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 JCADQ9P266 1359 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 LRP6O75581 1613 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 NRKQ7Z2Y5 1582 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 ANKRD34BA5PLL1 514 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 SCGB1D2O95969 90 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 PABPC1P11940 636 aaKnown RBP4.85□□□□□ -1.63
APAF1-208ENST00000549007 AMPD1P23109 780 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 EXOSC10Q01780 885 aaKnown RBP4.85□□□□□ -1.63
APAF1-208ENST00000549007 SLBPQ14493 270 aaKnown RBP eCLIP4.85□□□□□ -1.63
APAF1-208ENST00000549007 CHSY3Q70JA7 882 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 ISL2Q96A47 359 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 ACDQ96AP0 544 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 SCLYQ96I15 445 aa4.85□□□□□ -1.63
APAF1-208ENST00000549007 MED1Q15648 1581 aaPredicted RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 CGNL1Q0VF96 1302 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 RGS13O14921 159 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 PRPF3O43395 683 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 C6orf222P0C671 652 aaPredicted RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 SLFN14P0C7P3 912 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 YARSP54577 528 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 ZNF513Q8N8E2 541 aaPredicted RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 MBIPQ9NS73 344 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 FAM105AQ9NUU6 356 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 NOB1Q9ULX3 412 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 ERBB4Q15303 1308 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 IQCA1LA6NCM1 817 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 KRT76Q01546 638 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 SUZ12Q15022 739 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 DUOXA2Q1HG44 320 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 DPY19L1Q2PZI1 675 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 MEX3CQ5U5Q3 659 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 C14orf80Q86SX3 495 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 COG3Q96JB2 828 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 ASPSCR1Q9BZE9 553 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 SSU72Q9NP77 194 aaKnown RBP4.84□□□□□ -1.63
APAF1-208ENST00000549007 ARHGEF10O15013 1369 aa4.84□□□□□ -1.63
APAF1-208ENST00000549007 ALS2Q96Q42 1657 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 TTC21AQ8NDW8 1320 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 OPA1O60313 960 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 LRRN2O75325 713 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 GCP02774 474 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 SOX5P35711 763 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 MORC1Q86VD1 984 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 HID1Q8IV36 788 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 KIFC2Q96AC6 838 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 IPO9Q96P70 1041 aaKnown RBP4.84□□□□□ -1.64
APAF1-208ENST00000549007 TRIM39Q9HCM9 518 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 AVENQ9NQS1 362 aaPredicted RBP4.84□□□□□ -1.64
APAF1-208ENST00000549007 CRIM1Q9NZV1 1036 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 ZIM2Q9NZV7 527 aa4.84□□□□□ -1.64
APAF1-208ENST00000549007 GPR55Q9Y2T6 319 aaPredicted RBP4.84□□□□□ -1.64
APAF1-208ENST00000549007 KIAA0232Q92628 1395 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 VAMP4O75379 141 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 ERVK-24P63145 666 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 HSP90AA2PQ14568 343 aaPredicted RBP4.83□□□□□ -1.64
APAF1-208ENST00000549007 CDH24Q86UP0 819 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 PMM1Q92871 262 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 LTV1Q96GA3 475 aaPredicted RBP4.83□□□□□ -1.64
APAF1-208ENST00000549007 CCDC74BQ96LY2 380 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 ZDHHC15Q96MV8 337 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 RUSC1Q9BVN2 902 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 PRDM11Q9NQV5 511 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 MCM8Q9UJA3 840 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 RIPOR2Q9Y4F9 1068 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 OVOS2A0A0J9YW53 1432 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 OVOS2Q6IE36 1432 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 PLD2O14939 933 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 TPD52L2O43399 206 aaKnown RBP4.83□□□□□ -1.64
APAF1-208ENST00000549007 RAB6AP20340 208 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 KCNJ6P48051 423 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 SLCO4C1Q6ZQN7 724 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 NANOS1Q8WY41 292 aaKnown RBP4.83□□□□□ -1.64
APAF1-208ENST00000549007 PSMD1Q99460 953 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 APBA2Q99767 749 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 OSGEPQ9NPF4 335 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 TCEAL9Q9UHQ7 104 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 USP19O94966 1318 aa4.83□□□□□ -1.64
APAF1-208ENST00000549007 LOC102724159A0A0B4J2E5 919 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ZNF891A8MT65 544 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 MCL1Q07820 350 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 COL9A3Q14050 684 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 PWP2Q15269 919 aaKnown RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 CDC37L1Q7L3B6 337 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 NXPE1Q8N323 547 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 C12orf50Q8NA57 414 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 WDR66Q8TBY9 1149 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 AKT3Q9Y243 479 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms