RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 COL22A1Q8NFW1 1626 aaPredicted RBP25.68■■□□□ 1.7
NPAS3-206ENST00000548645 LOC102724159A0A0B4J2E5 919 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 PP2D1A8MPX8 630 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 LCA5LO95447 670 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 PWP2Q15269 919 aaKnown RBP25.68■■□□□ 1.7
NPAS3-206ENST00000548645 MICALCLQ6ZW33 695 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 C2CD5Q86YS7 1000 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 MAGEF1Q9HAY2 307 aa25.68■■□□□ 1.7
NPAS3-206ENST00000548645 ZEB2O60315 1214 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 SETQ01105 290 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-206ENST00000548645 IFT20Q8IY31 132 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 GSCP56915 257 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-206ENST00000548645 PLIN2Q99541 437 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 MEFVO15553 781 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-206ENST00000548645 AKR1B10O60218 316 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 CLSTN1O94985 981 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 VEGFAP15692 232 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-206ENST00000548645 CXCR5P32302 372 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 PDE4DQ08499 809 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 PCDHA4Q9UN74 947 aa25.67■■□□□ 1.7
NPAS3-206ENST00000548645 BAZ2BQ9UIF8 2168 aaKnown RBP25.66■■□□□ 1.7
NPAS3-206ENST00000548645 H0YHG0 523 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 EIF4A3P38919 411 aaKnown RBP25.66■■□□□ 1.7
NPAS3-206ENST00000548645 CFAP58Q5T655 872 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 KDM7AQ6ZMT4 941 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 PSMB7Q99436 277 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 CCDC194A0A1B0GVG4 234 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 ERVV-1B6SEH8 477 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 GPATCH11Q8N954 259 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 PIGBQ92521 554 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 SH3GLB2Q9NR46 395 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 DLEC1Q9Y238 1755 aa25.66■■□□□ 1.7
NPAS3-206ENST00000548645 FAM205AQ6ZU69 1335 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 FSBPO95073 299 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 CABS1Q96KC9 395 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 CARD10Q9BWT7 1032 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 SMARCAL1Q9NZC9 954 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 KIF5BP33176 963 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 ATP1A2P50993 1020 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 RNF14Q9UBS8 474 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 TSKSQ9UJT2 592 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 STRCP1A6NGW2 1772 aa25.65■■□□□ 1.7
NPAS3-206ENST00000548645 MAGEA1P43355 309 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 CFAP221Q4G0U5 840 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 CCDC178Q5BJE1 867 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 KCTD16Q68DU8 428 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 SH2D3CQ8N5H7 860 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 EPN3Q9H201 632 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 RBM12Q9NTZ6 932 aaKnown RBP25.64■■□□□ 1.7
NPAS3-206ENST00000548645 ZNF34Q8IZ26 560 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 IQCKQ8N0W5 287 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 PAGR1Q9BTK6 254 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 TMEM60Q9H2L4 133 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 EHD2Q9NZN4 543 aa25.64■■□□□ 1.7
NPAS3-206ENST00000548645 LAD1O00515 517 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 PJA2O43164 708 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 KRT14P02533 472 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 IGHMBP2P38935 993 aaKnown RBP25.64■■□□□ 1.69
NPAS3-206ENST00000548645 FNTAP49354 379 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 PAK2Q13177 524 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 EMC10Q5UCC4 262 aa25.64■■□□□ 1.69
NPAS3-206ENST00000548645 CCDC43Q96MW1 224 aaKnown RBP25.64■■□□□ 1.69
NPAS3-206ENST00000548645 ORC4O43929 436 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 LSP1P33241 339 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 DYNLL1P63167 89 aaKnown RBP25.63■■□□□ 1.69
NPAS3-206ENST00000548645 STK4Q13043 487 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 YTHDF3Q7Z739 585 aaKnown RBP25.63■■□□□ 1.69
NPAS3-206ENST00000548645 TRIM9Q9C026 710 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 MYH10P35580 1976 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 TLR10Q9BXR5 811 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 GDF3Q9NR23 364 aa25.63■■□□□ 1.69
NPAS3-206ENST00000548645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.63■■□□□ 1.69
NPAS3-206ENST00000548645 NMT2O60551 498 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 CYP19A1P11511 503 aaPredicted RBP25.62■■□□□ 1.69
NPAS3-206ENST00000548645 ASIC1P78348 528 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 DZIP3Q86Y13 1208 aaKnown RBP25.62■■□□□ 1.69
NPAS3-206ENST00000548645 RASGRP4Q8TDF6 673 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 NOX5Q96PH1 765 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 ZBTB1Q9Y2K1 713 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 USP17L12C9JPN9 530 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 USP17L21D6R901 530 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 NCK2O43639 380 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 MAP2K2P36507 400 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 VWA3BQ502W6 1294 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 CCDC84Q86UT8 332 aaPredicted RBP25.62■■□□□ 1.69
NPAS3-206ENST00000548645 RNPC3Q96LT9 517 aaKnown RBP25.62■■□□□ 1.69
NPAS3-206ENST00000548645 FAM207AQ9NSI2 230 aaPredicted RBP25.62■■□□□ 1.69
NPAS3-206ENST00000548645 SIK3Q9Y2K2 1263 aa25.62■■□□□ 1.69
NPAS3-206ENST00000548645 PRPHP41219 470 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 NAP1L1P55209 391 aaKnown RBP25.61■■□□□ 1.69
NPAS3-206ENST00000548645 CD302Q8IX05 232 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 MREGQ8N565 214 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 RNF10Q8N5U6 811 aaKnown RBP25.61■■□□□ 1.69
NPAS3-206ENST00000548645 TCP11L1Q9NUJ3 509 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 SHANK3Q9BYB0 1731 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 PLCG1P19174 1290 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 NAA35Q5VZE5 725 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 C7orf25Q9BPX7 421 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 NFU1Q9UMS0 254 aa25.61■■□□□ 1.69
NPAS3-206ENST00000548645 NUP98P52948 1817 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms