RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	KCNC1	P48547	511 aa		6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	TARBP2	Q15633	366 aa	Known RBP	6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	GGN	Q86UU5	652 aa		6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	TEPSIN	Q96N21	525 aa		6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	KLHL25	Q9H0H3	589 aa		6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	EFR3B	Q9Y2G0	817 aa		6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211	DIS3	Q9Y2L1	958 aa	Known RBP	6.39	□□□□□ -1.39
RPAP3-205	ENST00000548211		A0A087WZG4	1122 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	AURKA	O14965	403 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	EPHX1	P07099	455 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	DLX2	Q07687	328 aa	Predicted RBP	6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	RTP5	Q14D33	572 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	FRMD5	Q7Z6J6	570 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	CPNE8	Q86YQ8	564 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	NLGN1	Q8N2Q7	840 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211	PMF1-BGLAP	U3KQ54	211 aa		6.38	□□□□□ -1.39
RPAP3-205	ENST00000548211		A0A1W2PQH9	124 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	PML	P29590	882 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	CORO7	P57737	925 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	HTRA3	P83110	453 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	CAP1	Q01518	475 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	HEATR6	Q6AI08	1181 aa	Known RBP	6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	RCSD1	Q6JBY9	416 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	LIPI	Q6XZB0	460 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	ADAT2	Q7Z6V5	191 aa	Known RBP	6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	SAPCD2	Q86UD0	394 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	KLHL6	Q8WZ60	621 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	ALG3	Q92685	438 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	NOX5	Q96PH1	765 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	CRBN	Q96SW2	442 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	BDH2	Q9BUT1	245 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	WHRN	Q9P202	907 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	GULP1	Q9UBP9	304 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	FAN1	Q9Y2M0	1017 aa		6.37	□□□□□ -1.39
RPAP3-205	ENST00000548211	RECK	O95980	971 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	NCAM1	P13591	858 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	SOX9	P48436	509 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	GIPR	P48546	466 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	EIF6	P56537	245 aa	Known RBP	6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	PLP2	Q04941	152 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	NT5DC1	Q5TFE4	455 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	EEF1DP3	Q658K8	133 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	FERMT3	Q86UX7	667 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	METTL16	Q86W50	562 aa	Known RBP	6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	RGS22	Q8NE09	1264 aa		6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.36	□□□□□ -1.39
RPAP3-205	ENST00000548211	EIF4G1	Q04637	1599 aa	Known RBP	6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	C2orf71	A6NGG8	1288 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	TMCO4	Q5TGY1	634 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	ZNF654	Q8IZM8	581 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	LZTR1	Q8N653	840 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	SYT3	Q9BQG1	590 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	MTA3	Q9BTC8	594 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	RNF38	Q9H0F5	515 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	SIT1	Q9Y3P8	196 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	DUSP10	Q9Y6W6	482 aa		6.35	□□□□□ -1.39
RPAP3-205	ENST00000548211	SEPHS1	P49903	392 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	SLC7A5	Q01650	507 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	PPP2R5E	Q16537	467 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	C9orf131	Q5VYM1	1079 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	B3GNT8	Q7Z7M8	397 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	ARHGEF39	Q8N4T4	335 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	PHAX	Q9H814	394 aa	Known RBP	6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	BACE2	Q9Y5Z0	518 aa		6.34	□□□□□ -1.39
RPAP3-205	ENST00000548211	SH3D21	A4FU49	640 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	AMPD2	Q01433	879 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	COL9A2	Q14055	689 aa	Predicted RBP	6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	SMARCC2	Q8TAQ2	1214 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	DDX1	Q92499	740 aa	Known RBP	6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	TSPAN17	Q96FV3	270 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	GBP3	Q9H0R5	595 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	APEX2	Q9UBZ4	518 aa		6.33	□□□□□ -1.4
RPAP3-205	ENST00000548211	C7orf72	A4D263	438 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	SCAMP3	O14828	347 aa	Known RBP	6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	PPM1B	O75688	479 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	MBLAC2	Q68D91	279 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	DBX2	Q6ZNG2	339 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	FAM169B	Q8N8A8	192 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	GPRASP2	Q96D09	838 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	DDX11	Q96FC9	970 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	SHD	Q96IW2	340 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	LGR4	Q9BXB1	951 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	GPRC5C	Q9NQ84	441 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	SUGT1	Q9Y2Z0	365 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	SLC12A7	Q9Y666	1083 aa		6.32	□□□□□ -1.4
RPAP3-205	ENST00000548211	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	FUCA1	P04066	466 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	NTRK1	P04629	796 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	ADRB1	P08588	477 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	PAM	P19021	973 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	NASP	P49321	788 aa	Predicted RBP	6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	MFAP1	P55081	439 aa	Known RBP	6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	EFEMP1	Q12805	493 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	UBXN11	Q5T124	520 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	ZFYVE27	Q5T4F4	411 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	ERICH6B	Q5W0A0	696 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	KIAA1211L	Q6NV74	962 aa		6.31	□□□□□ -1.4
RPAP3-205	ENST00000548211	CABP7	Q86V35	215 aa		6.31	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms