RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 STK36Q9NRP7 1315 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 CLEC17AQ6ZS10 378 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 PHKBQ93100 1093 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 ARMC5Q96C12 935 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 ZNF333Q96JL9 665 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 A1CFQ9NQ94 594 aaKnown RBP20.03■□□□□ 0.8
HDAC7-227ENST00000548080 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 LCTP09848 1927 aa20.03■□□□□ 0.8
HDAC7-227ENST00000548080 VPS37CA5D8V6 355 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-227ENST00000548080 CNTN2Q02246 1040 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 NFKBIBQ15653 356 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 TKFCQ3LXA3 575 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 TMTC3Q6ZXV5 915 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 FBXO11Q86XK2 927 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 ABRAQ8N0Z2 381 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 PXYLP1Q8TE99 480 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 CLEC4DQ8WXI8 215 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 MTMR8Q96EF0 704 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 GBP4Q96PP9 640 aa20.02■□□□□ 0.8
HDAC7-227ENST00000548080 PURBQ96QR8 312 aaKnown RBP20.02■□□□□ 0.8
HDAC7-227ENST00000548080 DDX49Q9Y6V7 483 aaKnown RBP20.02■□□□□ 0.8
HDAC7-227ENST00000548080 H3BQV1 296 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 ZBTB5O15062 677 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 F13A1P00488 732 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 HMGCRP04035 888 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 XRCC5P13010 732 aaKnown RBP20.01■□□□□ 0.79
HDAC7-227ENST00000548080 CYP2C19P33261 490 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 SOX10P56693 466 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 TRIM22Q8IYM9 498 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 SLC26A6Q9BXS9 759 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 UNC93B1Q9H1C4 597 aa20.01■□□□□ 0.79
HDAC7-227ENST00000548080 HOXC6P09630 235 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 GNAQP50148 359 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 ZNF792Q3KQV3 632 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 SLC30A10Q6XR72 485 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 RGS22Q8NE09 1264 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 WASF1Q92558 559 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 TBC1D5Q92609 795 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 MAML3Q96JK9 1138 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 SPZ1Q9BXG8 430 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 MCM3APO60318 1980 aa20■□□□□ 0.79
HDAC7-227ENST00000548080 CCL5P13501 91 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 CACNB2Q08289 660 aaPredicted RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 FUT2Q10981 343 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 FGD4Q96M96 766 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 ALG1Q9BT22 464 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 RNF26Q9BY78 433 aaPredicted RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 CYP39A1Q9NYL5 469 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 RBBP6Q7Z6E9 1792 aaKnown RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 CNTNAP5Q8WYK1 1306 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 DNAJC25-GNG10A0A024R161 153 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 POTEB2H3BUK9 544 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 BAG4O95429 457 aaKnown RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 PRKAR2AP13861 404 aaKnown RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 CALML3P27482 149 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 UBXN2AP68543 259 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 BAATQ14032 418 aaPredicted RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 RRP36Q96EU6 259 aaKnown RBP19.99■□□□□ 0.79
HDAC7-227ENST00000548080 C8orf76Q96K31 380 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 AMNQ9BXJ7 453 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 PCDHA1Q9Y5I3 950 aa19.99■□□□□ 0.79
HDAC7-227ENST00000548080 KIAA0100Q14667 2235 aaKnown RBP19.98■□□□□ 0.79
HDAC7-227ENST00000548080 ABCB11O95342 1321 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 PNMA6FA0A0J9YX94 578 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 PRPF3O43395 683 aaKnown RBP19.98■□□□□ 0.79
HDAC7-227ENST00000548080 DEXIO95424 95 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 MCM4P33991 863 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 FOSBP53539 338 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 AKAP17AQ02040 695 aaKnown RBP19.98■□□□□ 0.79
HDAC7-227ENST00000548080 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 SLC5A4Q9NY91 659 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 ATP6V1DQ9Y5K8 247 aa19.98■□□□□ 0.79
HDAC7-227ENST00000548080 BRCA2P51587 3418 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 POTEFA5A3E0 1075 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 SOWAHBA6NEL2 793 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 OPLAHO14841 1288 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 CCND3P30281 292 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-227ENST00000548080 FBXO18Q8NFZ0 1043 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
HDAC7-227ENST00000548080 ASTN1O14525 1302 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 PFASO15067 1338 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 MFSD14CQ5VZR4 134 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 RNF207Q6ZRF8 634 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 TRMT44Q8IYL2 757 aaKnown RBP19.96■□□□□ 0.79
HDAC7-227ENST00000548080 FAM133AQ8N9E0 248 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 TRPV1Q8NER1 839 aa19.96■□□□□ 0.79
HDAC7-227ENST00000548080 GPKOWQ92917 476 aaPredicted RBP eCLIP19.96■□□□□ 0.79
HDAC7-227ENST00000548080 SEC63Q9UGP8 760 aaKnown RBP19.96■□□□□ 0.79
HDAC7-227ENST00000548080 V9GY48 417 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-227ENST00000548080 RPS6P62753 249 aaKnown RBP19.95■□□□□ 0.78
HDAC7-227ENST00000548080 GUCY1B3Q02153 619 aa19.95■□□□□ 0.78
HDAC7-227ENST00000548080 OLFML2BQ68BL8 750 aa19.95■□□□□ 0.78
HDAC7-227ENST00000548080 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
HDAC7-227ENST00000548080 AIFM3Q96NN9 605 aa19.95■□□□□ 0.78
HDAC7-227ENST00000548080 TINF2Q9BSI4 451 aa19.95■□□□□ 0.78
HDAC7-227ENST00000548080 MRPL11Q9Y3B7 192 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms