RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 SNHG28P0DPA3 235 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 MSNP26038 577 aaKnown RBP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 MMP14P50281 582 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF75DP51815 510 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 RBM5P52756 815 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 TCP10Q12799 353 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF174Q15697 407 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 LONRF3Q496Y0 759 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 PLA2G4DQ86XP0 818 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 APOBEC3FQ8IUX4 373 aaKnown RBP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 FAM177A1Q8N128 213 aaPredicted RBP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 BPIFA3Q9BQP9 254 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC65-203ENST00000547861 DOCK1Q14185 1865 aa9.21□□□□□ -0.94
CCDC65-203ENST00000547861 FAM196BA6NMK8 535 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 TTLL1O95922 423 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 SMARCA1P28370 1054 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 NAPAP54920 295 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 SOX10P56693 466 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 DLGAP5Q15398 846 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 CFAP100Q494V2 611 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 GALNT17Q6IS24 598 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 SARM1Q6SZW1 724 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 USP49Q70CQ1 688 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 SH3BP5LQ7L8J4 393 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 ARMC9Q7Z3E5 817 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 CTU1Q7Z7A3 348 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 HOMER1Q86YM7 354 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 CNNM3Q8NE01 707 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 TMC2Q8TDI7 906 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 RRP36Q96EU6 259 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 NAT10Q9H0A0 1025 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 DHX36Q9H2U1 1008 aaKnown RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 RIOX1Q9H6W3 641 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.2□□□□□ -0.94
CCDC65-203ENST00000547861 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 PCDHA6Q9UN73 950 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 FZD1Q9UP38 647 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 PCDHA8Q9Y5H6 950 aa9.2□□□□□ -0.94
CCDC65-203ENST00000547861 A0A087X0B3 334 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 CCDC194A0A1B0GVG4 234 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 MPHOSPH10O00566 681 aaKnown RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 POLR2DO15514 142 aaKnown RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 TM4SF4P48230 202 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 PTGDRQ13258 359 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 SHROOM1Q2M3G4 852 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ELOA2Q8IYF1 753 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 CCDC12Q8WUD4 166 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 PIGSQ96S52 555 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ZMYND12Q9H0C1 365 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 DEFB129Q9H1M3 183 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 CLIP2Q9UDT6 1046 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 SEC63Q9UGP8 760 aaKnown RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 BECN2A8MW95 431 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 hCG_1984214I3L0E3 225 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 CDC25BP30305 580 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 MCM7P33993 719 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 MDM2Q00987 491 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF543Q08ER8 600 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 POSTNQ15063 836 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 GRAMD1CQ8IYS0 662 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 PDILTQ8N807 584 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF713Q8N859 430 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 SPC24Q8NBT2 197 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF296Q8WUU4 475 aaPredicted RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 EPSTI1Q96J88 318 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 CCDC17Q96LX7 622 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 TRIM5Q9C035 493 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 UBA5Q9GZZ9 404 aa9.19□□□□□ -0.94
CCDC65-203ENST00000547861 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
CCDC65-203ENST00000547861 ESYT2A0FGR8 921 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 CLRN2A0PK11 232 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 ZNF500O60304 480 aaPredicted RBP9.18□□□□□ -0.94
CCDC65-203ENST00000547861 ENTPD3O75355 529 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 SREBF2Q12772 1141 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 INF2Q27J81 1249 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 CCDC96Q2M329 555 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 PPP4R3BQ5MIZ7 849 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 ZSCAN29Q8IWY8 852 aaPredicted RBP9.18□□□□□ -0.94
CCDC65-203ENST00000547861 C4orf32Q8N8J7 132 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 DHX58Q96C10 678 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 PRMT6Q96LA8 375 aaPredicted RBP9.18□□□□□ -0.94
CCDC65-203ENST00000547861 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 PI4KBQ9UBF8 816 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
CCDC65-203ENST00000547861 PCDHA5Q9Y5H7 936 aa9.18□□□□□ -0.94
CCDC65-203ENST00000547861 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
CCDC65-203ENST00000547861 GPR25O00155 361 aa9.17□□□□□ -0.94
CCDC65-203ENST00000547861 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms