RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 RTN1Q16799 776 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 HAUS2Q9NVX0 235 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 EHD2Q9NZN4 543 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 TPX2Q9ULW0 747 aaKnown RBP11.88□□□□□ -0.51
NPAS3-205ENST00000547068 NFU1Q9UMS0 254 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 CAPN6Q9Y6Q1 641 aa11.88□□□□□ -0.51
NPAS3-205ENST00000547068 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
NPAS3-205ENST00000547068 TNS1Q9HBL0 1735 aaKnown RBP11.88□□□□□ -0.51
NPAS3-205ENST00000547068 SRRM3A6NNA2 597 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 HMGB1P1B2RPK0 211 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 PRCPP42785 496 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 TTLL7Q6ZT98 887 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 IRF2BP1Q8IU81 584 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 RTN2O75298 545 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 FAM153BP0C7A2 387 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 GBP2P32456 591 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 HPDP32754 393 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 IRX1P78414 480 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 FAM153CQ494X1 144 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 CD302Q8IX05 232 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 FAM153AQ9UHL3 310 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 IQSEC3Q9UPP2 1182 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
NPAS3-205ENST00000547068 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
NPAS3-205ENST00000547068 DNM1LO00429 736 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 MOCS3O95396 460 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 RPSAP08865 295 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 DNM2P50570 870 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 IFFO1Q0D2I5 559 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 PAK2Q13177 524 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ALS2CR12Q96Q35 445 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 MAGEC2Q9UBF1 373 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 MYH10P35580 1976 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ANKRD18BA2A2Z9 1011 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 B4DLN1 442 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 GLI1P08151 1106 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 GUCY2FP51841 1108 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ZBED6P86452 979 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 KRT26Q7Z3Y9 468 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ARFGAP2Q8N6H7 521 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
NPAS3-205ENST00000547068 SH2D4AQ9H788 454 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 EPB41L5Q9HCM4 733 aa11.86□□□□□ -0.51
NPAS3-205ENST00000547068 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 GMNCA6NCL1 334 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 ZNF263O14978 683 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 BMP15O95972 392 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 ADD2P35612 726 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 GUCY2DQ02846 1103 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 ZNF174Q15697 407 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 MAATS1Q7Z4T9 603 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 MREGQ8N565 214 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 C1orf131Q8NDD1 294 aaKnown RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 MTRQ99707 1265 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 TTYH3Q9C0H2 523 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 GDF3Q9NR23 364 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 EXOC1Q9NV70 894 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 MYH7P12883 1935 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 ERVV-1B6SEH8 477 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 PPP1R12BO60237 982 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-205ENST00000547068 CLSTN1O94985 981 aa11.85□□□□□ -0.51
NPAS3-205ENST00000547068 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms