RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 SUPT3HO75486 399 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 BAG2O95816 211 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
SOD2-216ENST00000546260 CHN1P15882 459 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 AMPD2Q01433 879 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 OTUD6AQ7L8S5 288 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 LRRC8CQ8TDW0 803 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
SOD2-216ENST00000546260 EXOC1Q9NV70 894 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 LARSQ9P2J5 1176 aaKnown RBP11.36□□□□□ -0.59
SOD2-216ENST00000546260 DBF4Q9UBU7 674 aaPredicted RBP11.36□□□□□ -0.59
SOD2-216ENST00000546260 PACSIN2Q9UNF0 486 aaPredicted RBP11.36□□□□□ -0.59
SOD2-216ENST00000546260 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
SOD2-216ENST00000546260 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 RASSF2P50749 326 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 CRELD2Q6UXH1 353 aaPredicted RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 LRRC34Q8IZ02 419 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 MYD88Q99836 296 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 PCDHA13Q9Y5I0 950 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 FANCAO15360 1455 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 TMEM110-MUSTN1A8MSY1 372 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 FGFR1OPO95684 399 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 DNM2P50570 870 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 HAUS3Q68CZ6 603 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 PRMT1Q99873 361 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 RPS6KL1Q9Y6S9 549 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 MGRN1O60291 552 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 FDPSP14324 419 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 EIF4A3P38919 411 aaKnown RBP11.35□□□□□ -0.59
SOD2-216ENST00000546260 PDE6CP51160 858 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 ZMYM1Q5SVZ6 1142 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 RNF220Q5VTB9 566 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 FAM228AQ86W67 206 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 MAP7D3Q8IWC1 876 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 EPSTI1Q96J88 318 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 LMCD1Q9NZU5 365 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 SHROOM2Q13796 1616 aa11.35□□□□□ -0.59
SOD2-216ENST00000546260 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 TRAPPC3O43617 180 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 RNF8O76064 485 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 OATP04181 439 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 GLI1P08151 1106 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 ERFP50548 548 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 SEPT6Q14141 434 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 MORC4Q8TE76 937 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 SUCLG2Q96I99 432 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 ZNF570Q96NI8 536 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 HSD3B7Q9H2F3 369 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 ZNF18P17022 549 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 UBA7P41226 1012 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 HS2ST1Q7LGA3 356 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 RAB17Q9H0T7 212 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 FAF1Q9UNN5 650 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 LAMC1P11047 1609 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 A8MUI8 341 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 GHRP10912 638 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 RAPGEF1Q13905 1077 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 MB21D1Q8N884 522 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 FBXO41Q8TF61 875 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 ZCCHC18P0CG32 403 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 CDCA2Q69YH5 1023 aaPredicted RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 TLDC1Q6P9B6 456 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 KBTBD3Q8NAB2 608 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 TMBIM4Q9HC24 238 aa11.34□□□□□ -0.59
SOD2-216ENST00000546260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.34□□□□□ -0.59
SOD2-216ENST00000546260 MTRF1LQ9UGC7 380 aaKnown RBP11.34□□□□□ -0.59
SOD2-216ENST00000546260 B4E1Z4 1266 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 HSD17B3P37058 310 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 KIF11P52732 1056 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 RTN1Q16799 776 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
SOD2-216ENST00000546260 CARD9Q9H257 536 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms