RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 NKRFO15226 690 aaKnown RBP eCLIP17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 MTIF2P46199 727 aaKnown RBP17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 KRT83P78385 493 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 GPSM2P81274 684 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 PDE11AQ9HCR9 933 aa17.44■□□□□ 0.38
AP000439.3-201ENST00000545202 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 ATP1A1P05023 1023 aaKnown RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 AMPD3Q01432 767 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 MIIPQ5JXC2 388 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 KIAA1328Q86T90 577 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 FAM114A1Q8IWE2 563 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 KIAA0895Q8NCT3 520 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 NEK11Q8NG66 645 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 PCMTD1Q96MG8 357 aaPredicted RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 NOC4LQ9BVI4 516 aaKnown RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 TMEM260Q9NX78 707 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 CYLC1P35663 651 aaPredicted RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 TXKP42681 527 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 C15orf52Q6ZUT6 534 aaKnown RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 REXO1Q8N1G1 1221 aaKnown RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 CALML4Q96GE6 196 aa17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 NHEJ1Q9H9Q4 299 aaPredicted RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
AP000439.3-201ENST00000545202 RCCD1A6NED2 376 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 ZBED6P86452 979 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 CNNM4Q6P4Q7 775 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 SLC39A2Q9NP94 309 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 KRT86O43790 486 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 SRGAP2O75044 1071 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 UFL1O94874 794 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 ZNF662Q6ZS27 426 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 LACRTQ9GZZ8 138 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 SEMA6BQ9H3T3 888 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 SAR1BQ9Y6B6 198 aa17.42■□□□□ 0.38
AP000439.3-201ENST00000545202 PPP1R2P41236 205 aa17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 RHBDL3P58872 404 aa17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 VPS72Q15906 364 aa17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 NGLY1Q96IV0 654 aa17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 ADAM21Q9UKJ8 722 aa17.41■□□□□ 0.38
AP000439.3-201ENST00000545202 EIF3CLB5ME19 914 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 GPS2Q13227 327 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 GRB10Q13322 594 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 PAPD7Q5XG87 772 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 SV2BQ7L1I2 683 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 CCDC170Q8IYT3 715 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 ERGIC2Q96RQ1 377 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 EIF3CQ99613 913 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 BLOC1S4Q9NUP1 217 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 CALCOCO1Q9P1Z2 691 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 IPO7O95373 1038 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 TUBBP07437 444 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 PLCG2P16885 1265 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 HNRNPH2P55795 449 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 CASP8Q14790 479 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 RIOX1Q9H6W3 641 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 DUSP10Q9Y6W6 482 aa17.4■□□□□ 0.38
AP000439.3-201ENST00000545202 ESYT2A0FGR8 921 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 MYMKA6NI61 221 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 IL1R1P14778 569 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 CYP27A1Q02318 531 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 CALCRLQ16602 461 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 COBLL1Q53SF7 1204 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 FKBP15Q5T1M5 1219 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 CENPPQ6IPU0 288 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 WDR93Q6P2C0 686 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 TXLNBQ8N3L3 684 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 COA7Q96BR5 231 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 CAPZA3Q96KX2 299 aa17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.38
AP000439.3-201ENST00000545202 MYH10P35580 1976 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 PDHBP11177 359 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 NOVP48745 357 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 ORC2Q13416 577 aaPredicted RBP17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 FIGNQ5HY92 759 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 PRR5LQ6MZQ0 368 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 MSL3Q8N5Y2 521 aaKnown RBP17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 PNMA5Q96PV4 448 aa17.39■□□□□ 0.37
AP000439.3-201ENST00000545202 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms