RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
CPSF7-223ENST00000544669 FUT8Q9BYC5 575 aa14.56□□□□□ -0.08
CPSF7-223ENST00000544669 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
CPSF7-223ENST00000544669 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
CPSF7-223ENST00000544669 TARSL2A2RTX5 802 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 CYP2C19P33261 490 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 ADCY7P51828 1080 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 KIF5AQ12840 1032 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 TXNRD1Q16881 649 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 CCDC122Q5T0U0 273 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 KRT79Q5XKE5 535 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 CENPPQ6IPU0 288 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 PROM2Q8N271 834 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 GUF1Q8N442 669 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 RASGRP4Q8TDF6 673 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 LUC7LQ9NQ29 371 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 SAR1BQ9Y6B6 198 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 FLT1P17948 1338 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 UFL1O94874 794 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 VEGFAP15692 232 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 HNRNPH3P31942 346 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 MRPL12P52815 198 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 NFIXQ14938 502 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 CALCRLQ16602 461 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 HSP90B2PQ58FF3 399 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 GPATCH4Q5T3I0 446 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 PAPD7Q5XG87 772 aaKnown RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 PPP4R3AQ6IN85 833 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 ACRBPQ8NEB7 543 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 TBCKQ8TEA7 893 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 EXOC4Q96A65 974 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-223ENST00000544669 CRAMP1Q96RY5 1269 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 VIPAS39Q9H9C1 493 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 MAPK8IP1Q9UQF2 711 aa14.55□□□□□ -0.08
CPSF7-223ENST00000544669 GNA14O95837 355 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 PRLRP16471 622 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 CDC25AP30304 524 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 HOXA10P31260 410 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-223ENST00000544669 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 TRAPPC11Q7Z392 1133 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 CNOT6LQ96LI5 555 aaKnown RBP14.54□□□□□ -0.08
CPSF7-223ENST00000544669 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 MTMR9Q96QG7 549 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 IRX2Q9BZI1 471 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-223ENST00000544669 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
CPSF7-223ENST00000544669 CASZ1Q86V15 1759 aa14.54□□□□□ -0.08
CPSF7-223ENST00000544669 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 TECP42680 631 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 AMPD2Q01433 879 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 BEND6Q5SZJ8 279 aaPredicted RBP14.53□□□□□ -0.08
CPSF7-223ENST00000544669 TEX2Q8IWB9 1127 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 TRIM58Q8NG06 486 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 DUSP9Q99956 384 aaKnown RBP14.53□□□□□ -0.08
CPSF7-223ENST00000544669 TTYH3Q9C0H2 523 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 MED4Q9NPJ6 270 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 ZHX1Q9UKY1 873 aaPredicted RBP14.53□□□□□ -0.08
CPSF7-223ENST00000544669 GUCA1BQ9UMX6 200 aa14.53□□□□□ -0.08
CPSF7-223ENST00000544669 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 TRIM49BA6NDI0 452 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 SNHG28P0DPA3 235 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 GPSM2P81274 684 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 ITIH3Q06033 890 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 MAN2A1Q16706 1144 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 MFSD14BQ5SR56 506 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 ANKRD40Q6AI12 368 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 CCDC155Q8N6L0 562 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 LARP4BQ92615 738 aaKnown RBP14.52□□□□□ -0.08
CPSF7-223ENST00000544669 CEP95Q96GE4 821 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 COA1Q9GZY4 146 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 ANKZF1Q9H8Y5 726 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 NHEJ1Q9H9Q4 299 aaPredicted RBP14.52□□□□□ -0.08
CPSF7-223ENST00000544669 MTMR4Q9NYA4 1195 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 SAP30BPQ9UHR5 308 aaKnown RBP14.52□□□□□ -0.08
CPSF7-223ENST00000544669 NHSQ6T4R5 1651 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
CPSF7-223ENST00000544669 B4DLN1 442 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 TACC1O75410 805 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 TTLL1O95922 423 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.09
CPSF7-223ENST00000544669 VAV2P52735 878 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 EVX2Q03828 476 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 VWA3BQ502W6 1294 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 CCDC17Q96LX7 622 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 PIGSQ96S52 555 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 CHP1Q99653 195 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 CWC15Q9P013 229 aaKnown RBP14.52□□□□□ -0.09
CPSF7-223ENST00000544669 L1RE1Q9UN81 338 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 PLAGL2Q9UPG8 496 aa14.52□□□□□ -0.09
CPSF7-223ENST00000544669 NAV1Q8NEY1 1877 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 PP2D1A8MPX8 630 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 SEC31AO94979 1220 aaKnown RBP14.51□□□□□ -0.09
CPSF7-223ENST00000544669 PDHBP11177 359 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 RHBDL3P58872 404 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 PRR5LQ6MZQ0 368 aa14.51□□□□□ -0.09
CPSF7-223ENST00000544669 USP17L2Q6R6M4 530 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms