RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARL6IP4Q66PJ3 421 aaKnown RBP34.62■■■■□ 3.13
CCM2-219ENST00000544363 GADL1Q6ZQY3 521 aa34.62■■■■□ 3.13
CCM2-219ENST00000544363 WNK4Q96J92 1243 aa34.62■■■■□ 3.13
CCM2-219ENST00000544363 CELF2O95319 508 aaKnown RBP34.61■■■■□ 3.13
CCM2-219ENST00000544363 REPS2Q8NFH8 660 aa34.61■■■■□ 3.13
CCM2-219ENST00000544363 P2RX7Q99572 595 aaKnown RBP34.61■■■■□ 3.13
CCM2-219ENST00000544363 FAM237AA0A1B0GTK4 181 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 SPDYE3A6NKU9 549 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 GCOM1H8Y6P7 765 aaPredicted RBP34.6■■■■□ 3.13
CCM2-219ENST00000544363 LAD1O00515 517 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 CFBP00751 764 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 POLR2MP0CAP2 368 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 HOXA7P31268 230 aaPredicted RBP34.6■■■■□ 3.13
CCM2-219ENST00000544363 NDUFA8P51970 172 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 GSE1Q14687 1217 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 CHADLQ6NUI6 762 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 C2orf69Q8N8R5 385 aa34.6■■■■□ 3.13
CCM2-219ENST00000544363 PFKFB1P16118 471 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 HOXA13P31271 388 aaPredicted RBP34.59■■■■□ 3.13
CCM2-219ENST00000544363 OAZ1P54368 228 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 FMR1NBQ8N0W7 255 aaPredicted RBP34.59■■■■□ 3.13
CCM2-219ENST00000544363 TBC1D5Q92609 795 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 SPDYE16A6NNV3 312 aaPredicted RBP34.59■■■■□ 3.13
CCM2-219ENST00000544363 ALAS1P13196 640 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 GJA5P36382 358 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 CSRNP2Q9H175 543 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 NUP62CLQ9H1M0 184 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 TMEM60Q9H2L4 133 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 HPSEQ9Y251 543 aa34.59■■■■□ 3.13
CCM2-219ENST00000544363 ITGBL1O95965 494 aaPredicted RBP34.58■■■■□ 3.13
CCM2-219ENST00000544363 ZNF445P59923 1031 aa34.58■■■■□ 3.13
CCM2-219ENST00000544363 PPP4R3AQ6IN85 833 aa34.58■■■■□ 3.13
CCM2-219ENST00000544363 CLEC4DQ8WXI8 215 aa34.58■■■■□ 3.13
CCM2-219ENST00000544363 NAP1L4Q99733 375 aaKnown RBP34.58■■■■□ 3.13
CCM2-219ENST00000544363 NEMFO60524 1076 aa34.57■■■■□ 3.12
CCM2-219ENST00000544363 LETM1O95202 739 aaPredicted RBP34.57■■■■□ 3.12
CCM2-219ENST00000544363 USP11P51784 963 aa34.57■■■■□ 3.12
CCM2-219ENST00000544363 CLSTN2Q9H4D0 955 aa34.57■■■■□ 3.12
CCM2-219ENST00000544363 MYH7BA7E2Y1 1941 aa34.57■■■■□ 3.12
CCM2-219ENST00000544363 PRPHP41219 470 aa34.56■■■■□ 3.12
CCM2-219ENST00000544363 SPECC1Q5M775 1068 aa34.56■■■■□ 3.12
CCM2-219ENST00000544363 FASTKD5Q7L8L6 764 aaKnown RBP34.56■■■■□ 3.12
CCM2-219ENST00000544363 MCF2L2Q86YR7 1114 aa34.56■■■■□ 3.12
CCM2-219ENST00000544363 SYCE3A1L190 88 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 VWA3AA6NCI4 1184 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 ATP2A1O14983 1001 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 KINO60870 393 aaKnown RBP34.55■■■■□ 3.12
CCM2-219ENST00000544363 TDP2O95551 362 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 GCFC2P16383 781 aaKnown RBP34.55■■■■□ 3.12
CCM2-219ENST00000544363 SREBF1P36956 1147 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 MOGSQ13724 837 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 IL17AQ16552 155 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 CRYGNQ8WXF5 182 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 FAM13BQ9NYF5 915 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 ZNF214Q9UL59 606 aaPredicted RBP34.55■■■■□ 3.12
CCM2-219ENST00000544363 AGTPBP1Q9UPW5 1226 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 COL11A1P12107 1806 aaPredicted RBP34.55■■■■□ 3.12
CCM2-219ENST00000544363 GHRHRQ02643 423 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 SNAPC2Q13487 334 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 FCHSD1Q86WN1 690 aa34.55■■■■□ 3.12
CCM2-219ENST00000544363 NFIBO00712 420 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 OR52Z1P0C646 297 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 HSD17B4P51659 736 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 ARHGAP4P98171 946 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 TMEM132BQ14DG7 1078 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 TRERF1Q96PN7 1200 aa34.54■■■■□ 3.12
CCM2-219ENST00000544363 ZNF202O95125 648 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 SYKP43405 635 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 MUM1L1Q5H9M0 696 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 DTHD1Q6ZMT9 781 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 POTEDQ86YR6 584 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 SAMD3Q8N6K7 520 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 HOMER2Q9NSB8 354 aa34.53■■■■□ 3.12
CCM2-219ENST00000544363 CAMK4Q16566 473 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 CST9Q5W186 159 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 SNRNP48Q6IEG0 339 aaKnown RBP34.52■■■■□ 3.12
CCM2-219ENST00000544363 MOXD1Q6UVY6 613 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 TNMDQ9H2S6 317 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 MAP3K20Q9NYL2 800 aaKnown RBP34.52■■■■□ 3.12
CCM2-219ENST00000544363 KCNH3Q9ULD8 1083 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 CYP3A7-CYP3A51PA0A087WV96 503 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 SLC37A4O43826 429 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 CYP3A7P24462 503 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 LONP1P36776 959 aaKnown RBP34.52■■■■□ 3.12
CCM2-219ENST00000544363 TEX13BQ9BXU2 312 aa34.52■■■■□ 3.12
CCM2-219ENST00000544363 DDX25Q9UHL0 483 aaKnown RBP34.52■■■■□ 3.12
CCM2-219ENST00000544363 IRX3P78415 501 aaPredicted RBP34.51■■■■□ 3.11
CCM2-219ENST00000544363 EHMT1Q9H9B1 1298 aa34.51■■■■□ 3.11
CCM2-219ENST00000544363 RIPK3Q9Y572 518 aa34.51■■■■□ 3.11
CCM2-219ENST00000544363 PABPC4Q13310 644 aaKnown RBP eCLIP34.5■■■■□ 3.11
CCM2-219ENST00000544363 CALCRLQ16602 461 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 LBX2Q6XYB7 198 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 USP49Q70CQ1 688 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 MB21D1Q8N884 522 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 MBOAT7Q96N66 472 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 MTMR9Q96QG7 549 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 RNF146Q9NTX7 359 aa34.5■■■■□ 3.11
CCM2-219ENST00000544363 CYP3A4P08684 503 aa34.49■■■■□ 3.11
CCM2-219ENST00000544363 TKFCQ3LXA3 575 aa34.49■■■■□ 3.11
CCM2-219ENST00000544363 GPAT2Q6NUI2 795 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms