RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 TTYH3Q9C0H2 523 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PUS7LQ9H0K6 701 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 CUEDC2Q9H467 287 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 SLC52A2Q9HAB3 445 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 EBF2Q9HAK2 575 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 KCNJ14Q9UNX9 436 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PLAGL2Q9UPG8 496 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 RIPOR2Q9Y4F9 1068 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ARHGAP23Q9P227 1491 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ECM29Q5VYK3 1845 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 A0A0G2JS52 829 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 KRT14P02533 472 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 UQCRFS1P1P0C7P4 283 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PAX7P23759 505 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PRPHP41219 470 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 MATR3P43243 847 aaKnown RBP eCLIP5.52□□□□□ -1.53
LMO3-229ENST00000543721 PPP2R2AP63151 447 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ITIH4Q14624 930 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 SEPT2Q15019 361 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ODF2Q5BJF6 829 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 AKNAD1Q5T1N1 836 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 MFSD6Q6ZSS7 791 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 USP49Q70CQ1 688 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 SMYD4Q8IYR2 804 aaPredicted RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 SH2D3CQ8N5H7 860 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 CCDC63Q8NA47 563 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 CCDC197Q8NCU1 140 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 RASSF8Q8NHQ8 419 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 HVCN1Q96D96 273 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 SPAG5Q96R06 1193 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 NSRP1Q9H0G5 558 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 NAPBQ9H115 298 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 TAF1DQ9H5J8 278 aaPredicted RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 NOP53Q9NZM5 478 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 CPSF2Q9P2I0 782 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 LRWD1Q9UFC0 647 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ABCB11O95342 1321 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 XDHP47989 1333 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 UBR1Q8IWV7 1749 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 MYH7P12883 1935 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 SSU72P8A0A1W2PR75 194 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PRPF3O43395 683 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 ATP6V1G2O95670 118 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 RXRAP19793 462 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PRCPP42785 496 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 MTIF2P46199 727 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 IFI16Q16666 785 aaKnown RBP5.52□□□□□ -1.53
LMO3-229ENST00000543721 PDXDC2PQ6P474 469 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 FANCBQ8NB91 859 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 HDAC7Q8WUI4 952 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 TAF4BQ92750 862 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PLCD4Q9BRC7 762 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 ISCUQ9H1K1 167 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 NOD2Q9HC29 1040 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.52□□□□□ -1.53
LMO3-229ENST00000543721 NFU1Q9UMS0 254 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PLAAQ9Y263 795 aa5.52□□□□□ -1.53
LMO3-229ENST00000543721 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 ANKRD33BA6NCL7 494 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 CCT8L1PA6NM43 557 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 CCNE1P24864 410 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 STAT6P42226 847 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 ZAP70P43403 619 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 SEC24CP53992 1094 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 SLC7A5Q01650 507 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 GUCY2DQ02846 1103 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 NR5A1Q13285 461 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 NBPF10Q6P3W6 841 aaKnown RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 TEX9Q8N6V9 391 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 GBP7Q8N8V2 638 aaPredicted RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 IFT81Q8WYA0 676 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 TATDN2Q93075 761 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 UBAC1Q9BSL1 405 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 TMX4Q9H1E5 349 aaPredicted RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 HAUS2Q9NVX0 235 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 A0A087X0B3 334 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 ORC4O43929 436 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 RHOBTB3O94955 611 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 PDHBP11177 359 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 CARSP49589 748 aaKnown RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 KIF11P52732 1056 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 ELF3P78545 371 aaPredicted RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 TRAF1Q13077 416 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 EZH2Q15910 746 aaKnown RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 GRIPAP1Q4V328 841 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 NAIF1Q69YI7 327 aaPredicted RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 LRP10Q7Z4F1 713 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 HOOK3Q86VS8 718 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 IRF2BP1Q8IU81 584 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 CSGALNACT2Q8N6G5 542 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 CCT6BQ92526 530 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 PBKQ96KB5 322 aa5.51□□□□□ -1.53
LMO3-229ENST00000543721 CALR3Q96L12 384 aaKnown RBP5.51□□□□□ -1.53
LMO3-229ENST00000543721 NOC4LQ9BVI4 516 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms