RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	LRRC47	Q8N1G4	583 aa	Known RBP	8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	GTF3C2	Q8WUA4	911 aa	Predicted RBP	8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ERCC4	Q92889	916 aa	Predicted RBP	8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PNMA2	Q9UL42	364 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PRR12	Q9ULL5	1215 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SPDYE16	A6NNV3	312 aa	Predicted RBP	8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	KLRF2	D3W0D1	207 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ICAM1	P05362	532 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	RRP12	Q5JTH9	1297 aa	Known RBP	8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	WWC2	Q6AWC2	1192 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SDF4	Q9BRK5	362 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FUCA2	Q9BTY2	467 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CLSTN2	Q9H4D0	955 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CFAP45	Q9UL16	551 aa		8.36	□□□□□ -1.07
GTF2H3-212	ENST00000543341	DCAF8L1	A6NGE4	600 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	VWA5A	O00534	786 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SCG2	P13521	617 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ZNF75D	P51815	510 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	TPM4	P67936	248 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CCAR1	Q8IX12	1150 aa	Known RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PLCD3	Q8N3E9	789 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ANKRD7	Q92527	254 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	P2RX7	Q99572	595 aa	Known RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FOXP1	Q9H334	677 aa	Predicted RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	LOC102724159	A0A0B4J2E5	919 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SMC2	O95347	1197 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	NF2	P35240	595 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	STAT2	P52630	851 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	GTF2A2	P52657	109 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PWP2	Q15269	919 aa	Known RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SYDE2	Q5VT97	1194 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	TTBK2	Q6IQ55	1244 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	BRI3BP	Q8WY22	251 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	GPBP1L1	Q9HC44	474 aa	Predicted RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	RIC8A	Q9NPQ8	531 aa		8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ZNF215	Q9UL58	517 aa	Predicted RBP	8.35	□□□□□ -1.07
GTF2H3-212	ENST00000543341	DNAJC25-GNG10	A0A024R161	153 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	TMEM88B	A6NKF7	163 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	POLR3G	O15318	223 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	GPS2	Q13227	327 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ORC2	Q13416	577 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	DGKZ	Q13574	1117 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	BMS1	Q14692	1282 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ELF2	Q15723	593 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	TKFC	Q3LXA3	575 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	EAPP	Q56P03	285 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CCAR2	Q8N163	923 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	MB21D1	Q8N884	522 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SHCBP1	Q8NEM2	672 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CYP3A7-CYP3A51P	A0A087WV96	503 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	MEIS2	O14770	477 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	NEMF	O60524	1076 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CELF2	O95319	508 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SLU7	O95391	586 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CYP3A7	P24462	503 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	KIF23	Q02241	960 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FAM83B	Q5T0W9	1011 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	MICU3	Q86XE3	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FSIP1	Q8NA03	581 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP6NL	Q92738	828 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PGBD1	Q96JS3	809 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PICK1	Q9NRD5	415 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L15	C9J2P7	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L13	C9JLJ4	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L11	C9JVI0	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L18	D6R9N7	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L22	D6RA61	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L17	D6RBQ6	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L19	D6RCP7	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L20	D6RJB6	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	APLP1	P51693	650 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	USP17L24	Q0WX57	530 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SNAPC2	Q13487	334 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	IRF5	Q13568	498 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	RGMB	Q6NW40	437 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FASTKD5	Q7L8L6	764 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	PRPF38A	Q8NAV1	312 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CTCFL	Q8NI51	663 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	CACTIN	Q8WUQ7	758 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	UBXN4	Q92575	508 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	FGD4	Q96M96	766 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	SLF1	Q9BQI6	1058 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	RPAP3	Q9H6T3	665 aa	Predicted RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	DDX41	Q9UJV9	622 aa	Known RBP	8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ZHX2	Q9Y6X8	837 aa		8.34	□□□□□ -1.07
GTF2H3-212	ENST00000543341	ABCB11	O95342	1321 aa		8.34	□□□□□ -1.08
GTF2H3-212	ENST00000543341	FAM237A	A0A1B0GTK4	181 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	KIF28P	B7ZC32	967 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	CYP3A4	P08684	503 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	BCR	P11274	1271 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	INHBE	P58166	350 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	ATL3	Q6DD88	541 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	OTUD7B	Q6GQQ9	843 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	C4orf32	Q8N8J7	132 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	C2orf69	Q8N8R5	385 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	WASF1	Q92558	559 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	NAT10	Q9H0A0	1025 aa	Known RBP	8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	ELP3	Q9H9T3	547 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	STX8	Q9UNK0	236 aa		8.33	□□□□□ -1.08
GTF2H3-212	ENST00000543341	CSAD	Q9Y600	493 aa		8.33	□□□□□ -1.08

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms