RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PDE1BQ01064 536 aa21.02■□□□□ 0.95
HDAC4-215ENST00000543185 V9GY48 417 aaPredicted RBP21.02■□□□□ 0.95
HDAC4-215ENST00000543185 AP2B1P63010 937 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 LAMC1P11047 1609 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 KRT26Q7Z3Y9 468 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
HDAC4-215ENST00000543185 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
HDAC4-215ENST00000543185 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 IQANK1A0A1B0GTG1 560 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 CPP00450 1065 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 H2AFZP0C0S5 128 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 H2AFVQ71UI9 128 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 TRIML2Q8N7C3 387 aa21.01■□□□□ 0.95
HDAC4-215ENST00000543185 YWHAGP61981 247 aaKnown RBP eCLIP21■□□□□ 0.95
HDAC4-215ENST00000543185 IRX1P78414 480 aaPredicted RBP21■□□□□ 0.95
HDAC4-215ENST00000543185 ATICP31939 592 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 TTLL7Q6ZT98 887 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 ATP6V0A1Q93050 837 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 ARPP21Q9UBL0 812 aaPredicted RBP21■□□□□ 0.95
HDAC4-215ENST00000543185 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
HDAC4-215ENST00000543185 GAS7O60861 476 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 FAM133BQ5BKY9 247 aaKnown RBP21■□□□□ 0.95
HDAC4-215ENST00000543185 ADCY9O60503 1353 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 EXOC1LA0A1B0GW35 172 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 NCAPH2Q6IBW4 605 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 NNTQ13423 1086 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 COL4A3BPQ9Y5P4 624 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
HDAC4-215ENST00000543185 NEK8Q86SG6 692 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 FBXL13Q8NEE6 735 aa21■□□□□ 0.95
HDAC4-215ENST00000543185 RPN1P04843 607 aaKnown RBP20.99■□□□□ 0.95
HDAC4-215ENST00000543185 POLR3EQ9NVU0 708 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 M0QZ92 97 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 CAV1Q03135 178 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 FSCBQ5H9T9 825 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 GPBP1Q86WP2 473 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 TEX11Q8IYF3 940 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
HDAC4-215ENST00000543185 ACEP12821 1306 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 TADA3O75528 432 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 APLFQ8IW19 511 aaPredicted RBP20.99■□□□□ 0.95
HDAC4-215ENST00000543185 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.99■□□□□ 0.954e-7■■■■■ 40.4
HDAC4-215ENST00000543185 SGK1O00141 431 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 EHHADHQ08426 723 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 ANKRD12Q6UB98 2062 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 SYNGAP1Q96PV0 1343 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 CRLF3Q8IUI8 442 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 ARMC2Q8NEN0 867 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 RPS6KC1Q96S38 1066 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 ZNF148Q9UQR1 794 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 KRT8P05787 483 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 DCAF5Q96JK2 942 aa20.99■□□□□ 0.95
HDAC4-215ENST00000543185 HEXIM1O94992 359 aaKnown RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 RAPH1Q70E73 1250 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 LCA5Q86VQ0 697 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 SYCE1LA8MT33 242 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 TMTC4Q5T4D3 741 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 LRRC37BQ96QE4 947 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 MDM2Q00987 491 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 SESTD1Q86VW0 696 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 NLRC4Q9NPP4 1024 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 ARHGAP26Q9UNA1 814 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 MYO1FO00160 1098 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 PODXLO00592 558 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 CHEK2O96017 543 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 BRD2P25440 801 aaKnown RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 EXOC3L4Q17RC7 722 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 STAMBPL1Q96FJ0 436 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 ZMYND12Q9H0C1 365 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 IRS4O14654 1257 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 TRPA1O75762 1119 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 MRFAP1Q9Y605 127 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 TNNC2P02585 160 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
HDAC4-215ENST00000543185 CAPN9O14815 690 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 KRT10P13645 584 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 CADPS2Q86UW7 1296 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 CEP70Q8NHQ1 597 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 GIMAP4Q9NUV9 329 aa20.98■□□□□ 0.95
HDAC4-215ENST00000543185 NBPF20Q3BBV1 942 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 PARP10Q53GL7 1025 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 PANK4Q9NVE7 773 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 ZNF518AQ6AHZ1 1483 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 ESRRAP11474 423 aaPredicted RBP20.97■□□□□ 0.95
HDAC4-215ENST00000543185 TERF2Q15554 542 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 EYA2O00167 538 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 TYW5A2RUC4 315 aaKnown RBP20.97■□□□□ 0.95
HDAC4-215ENST00000543185 ZBTB7BO15156 539 aaPredicted RBP20.97■□□□□ 0.95
HDAC4-215ENST00000543185 SEC24BO95487 1268 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 OATP04181 439 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 SGO2Q562F6 1265 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 MRGBPQ9NV56 204 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 PTPN22Q9Y2R2 807 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 PPME1Q9Y570 386 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 ING2Q9H160 280 aa20.97■□□□□ 0.95
HDAC4-215ENST00000543185 EFCAB14O75071 495 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms