RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 NOP9Q86U38 636 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 RNF217Q8TC41 542 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 DDX28Q9NUL7 540 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 IBTKQ9P2D0 1353 aaPredicted RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 MFAP3P55082 362 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 DAB2P98082 770 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 TMEM259Q4ZIN3 620 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SPOUT1Q5T280 376 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 PBKQ96KB5 322 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 TTC25Q96NG3 672 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SH3GL3Q99963 347 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 COG4Q9H9E3 785 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 NCOA5Q9HCD5 579 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 IQANK1A0A1B0GTG1 560 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 CPA1P15085 419 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SPATA1Q5VX52 437 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 EPB41L5Q9HCM4 733 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 INTUQ9ULD6 942 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SLC4A7Q9Y6M7 1214 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 PMS1P54277 932 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 EHHADHQ08426 723 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SPOPLQ6IQ16 392 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 MTBPQ96DY7 904 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 PFKFB1P16118 471 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 STAT2P52630 851 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 RBM6P78332 1123 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 FSCBQ5H9T9 825 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 KLC3Q6P597 504 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 SLFN12Q8IYM2 578 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 STX18Q9P2W9 335 aaKnown RBP15.3■□□□□ 0.04
TRPM1-203ENST00000542188 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
TRPM1-203ENST00000542188 CHUKO15111 745 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 TRIM67Q6ZTA4 783 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 TROQ12816 1431 aaPredicted RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 MCF2LO15068 1137 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 IFRD2Q12894 506 aaPredicted RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 PARD3BQ8TEW8 1205 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 ARHGAP26Q9UNA1 814 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 PGRMC1O00264 195 aaKnown RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 GTPBP6O43824 516 aaPredicted RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 TRPC1P48995 793 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 GRM1Q13255 1194 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 FAM81BQ96LP2 452 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 NR1H4Q96RI1 486 aaPredicted RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 IPO5O00410 1097 aaKnown RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 NR1D1P20393 614 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 XPAP23025 273 aaPredicted RBP15.29■□□□□ 0.04
TRPM1-203ENST00000542188 SERPINB10P48595 397 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 ADCY2Q08462 1091 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 STOML1Q9UBI4 398 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 ATP8A1Q9Y2Q0 1164 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 GAS7O60861 476 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 YIPF3Q9GZM5 350 aa15.29■□□□□ 0.04
TRPM1-203ENST00000542188 TYW5A2RUC4 315 aaKnown RBP15.28■□□□□ 0.04
TRPM1-203ENST00000542188 K7ENM7 598 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 HNRNPCP07910 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PTPREP23469 700 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PSMD7P51665 324 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PTK2Q05397 1052 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 CRLF3Q8IUI8 442 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 TAB3Q8N5C8 712 aaPredicted RBP15.28■□□□□ 0.04
TRPM1-203ENST00000542188 TEX9Q8N6V9 391 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 MAML1Q92585 1016 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 CYTH2Q99418 400 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 FIS1Q9Y3D6 152 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 MYO1FO00160 1098 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 TAC1P20366 129 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PSMC1P62191 440 aaKnown RBP15.28■□□□□ 0.04
TRPM1-203ENST00000542188 E2F4Q16254 413 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 ICE2Q659A1 982 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PHKBQ93100 1093 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 E2F6O75461 281 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 SUN2Q9UH99 717 aa15.28■□□□□ 0.04
TRPM1-203ENST00000542188 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms