RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CPLX2Q6PUV4 134 aaKnown RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 ZSCAN29Q8IWY8 852 aaPredicted RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 HDAC7Q8WUI4 952 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
THBS3-211ENST00000541990 UBAC1Q9BSL1 405 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 MKNK2Q9HBH9 465 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 VPS54Q9P1Q0 977 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 DUSP10Q9Y6W6 482 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 FAM169AQ9Y6X4 670 aa10.22□□□□□ -0.77
THBS3-211ENST00000541990 GRIN2DO15399 1336 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 ASTN2O75129 1339 aaPredicted RBP10.21□□□□□ -0.77
THBS3-211ENST00000541990 FLT1P17948 1338 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 A0A087WUV0 522 aaPredicted RBP10.21□□□□□ -0.77
THBS3-211ENST00000541990 TCP10L2B9ZVM9 353 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 CRKP46108 304 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 IRAK1P51617 712 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 WTAPQ15007 396 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 MCTP2Q6DN12 878 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 APOBEC3HQ6NTF7 200 aaKnown RBP10.21□□□□□ -0.77
THBS3-211ENST00000541990 TMTC1Q8IUR5 882 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 MYCBPQ99417 103 aaPredicted RBP10.21□□□□□ -0.77
THBS3-211ENST00000541990 DEF6Q9H4E7 631 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 SMARCAL1Q9NZC9 954 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 SLC12A7Q9Y666 1083 aa10.21□□□□□ -0.77
THBS3-211ENST00000541990 NDUFA10O95299 355 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 GNAT2P19087 354 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 POLD1P28340 1107 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 DACT2Q5SW24 774 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 ELOA2Q8IYF1 753 aaPredicted RBP10.21□□□□□ -0.78
THBS3-211ENST00000541990 STAG1Q8WVM7 1258 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 IL17RBQ9NRM6 502 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 A0A1B0GUL6 1792 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 WDR19Q8NEZ3 1342 aa10.21□□□□□ -0.78
THBS3-211ENST00000541990 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 ERLIN2O94905 339 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 BAG3O95817 575 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 PTGER2P43116 358 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 COPB1P53618 953 aaKnown RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 PPARDQ03181 441 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 ALX1Q15699 326 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 CYP26C1Q6V0L0 522 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 CCDC84Q86UT8 332 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 SUGP1Q8IWZ8 645 aaKnown RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 MTFR1LQ9H019 292 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 ACBD3Q9H3P7 528 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 VIPAS39Q9H9C1 493 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 PIM2Q9P1W9 311 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 EPN1Q9Y6I3 576 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 COL4A5P29400 1685 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 MYH7P12883 1935 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 GPR75-ASB3A0A0A6YYF3 556 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 TTC26A0AVF1 554 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 TRIM49BA6NDI0 452 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 GOLGA6CA6NDK9 693 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 DDTLA6NHG4 134 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 GOLGA6DP0CG33 693 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 HNRNPH1P31943 449 aaKnown RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 FILIP1LQ4L180 1135 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 C12orf60Q5U649 245 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 MTRQ99707 1265 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 GOLGA6AQ9NYA3 693 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 GJA3Q9Y6H8 435 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 SCN9AQ15858 1988 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 TUBB2AQ13885 445 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 RILPL1Q5EBL4 403 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 WDR59Q6PJI9 974 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 FAM76AQ8TAV0 307 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 BCAS4Q8TDM0 211 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 SMCR8Q8TEV9 937 aaPredicted RBP10.2□□□□□ -0.78
THBS3-211ENST00000541990 EYA3Q99504 573 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 TUBB2BQ9BVA1 445 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 EHD2Q9NZN4 543 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 GDAQ9Y2T3 454 aa10.2□□□□□ -0.78
THBS3-211ENST00000541990 ITIH6Q6UXX5 1313 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 MYO1FO00160 1098 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 NFKBIEO00221 500 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 IFNAR1P17181 557 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 KLK7P49862 253 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 GNGT1P63211 74 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.78
THBS3-211ENST00000541990 DALRD3Q5D0E6 543 aaKnown RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 IFIT1BQ5T764 474 aaKnown RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 EP400NLQ6ZTU2 488 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 CTCFLQ8NI51 663 aaPredicted RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 ESR2Q92731 530 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 JAKMIP2Q96AA8 810 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 ARL8AQ96BM9 186 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms