RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CTAGE15A4D2H0 777 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 SERPINB2P05120 415 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CTAGE8P0CG41 777 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CTAGE6Q86UF2 777 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CTAGE4Q8IX94 777 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 REXO1Q8N1G1 1221 aaKnown RBP16.8■□□□□ 0.28
VARS2-211ENST00000541562 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 MYH6P13533 1939 aa16.8■□□□□ 0.28
VARS2-211ENST00000541562 CYP26C1Q6V0L0 522 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 RWDD2AQ9UIY3 292 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 E9PMD0 336 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 IPO7O95373 1038 aaKnown RBP16.79■□□□□ 0.28
VARS2-211ENST00000541562 MOCS3O95396 460 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 ANKZF1Q9H8Y5 726 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 MYH3P11055 1940 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 ORC4O43929 436 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 CALCRLQ16602 461 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
VARS2-211ENST00000541562 DISP2A7MBM2 1401 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 AKR1B10O60218 316 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 ADSSL1Q8N142 457 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 OR8K1Q8NGG5 319 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 FLT1P17948 1338 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 MYMKA6NI61 221 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 CHMP2AO43633 222 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 VGLL3A8MV65 326 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 RBAK-RBAKDNI3L0D1 243 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 GRAPQ13588 217 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 ECM1Q16610 540 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 PANX2Q96RD6 677 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 MYO6Q9UM54 1294 aa16.78■□□□□ 0.28
VARS2-211ENST00000541562 XIRP1Q702N8 1843 aaKnown RBP16.78■□□□□ 0.28
VARS2-211ENST00000541562 TRAF5O00463 557 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 ARHGAP25P42331 645 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 GRM4Q14833 912 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 LLGL1Q15334 1064 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.28
VARS2-211ENST00000541562 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.28
VARS2-211ENST00000541562 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 CCDC42Q96M95 316 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 TRIM9Q9C026 710 aa16.77■□□□□ 0.28
VARS2-211ENST00000541562 NHEJ1Q9H9Q4 299 aaPredicted RBP16.77■□□□□ 0.28
VARS2-211ENST00000541562 KLRC4O43908 158 aa16.77■□□□□ 0.27
VARS2-211ENST00000541562 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.27
VARS2-211ENST00000541562 HERVK_113P62684 666 aa16.77■□□□□ 0.27
VARS2-211ENST00000541562 WDR59Q6PJI9 974 aa16.77■□□□□ 0.27
VARS2-211ENST00000541562 CACNA2D4Q7Z3S7 1137 aa16.77■□□□□ 0.27
VARS2-211ENST00000541562 RTFDC1Q9BY42 306 aaPredicted RBP16.77■□□□□ 0.27
VARS2-211ENST00000541562 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 HDAC7Q8WUI4 952 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 MS4A14Q96JA4 679 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 ESYT3A0FGR9 886 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 CCDC40Q4G0X9 1142 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 TMTC1Q8IUR5 882 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 GPR161Q8N6U8 529 aaKnown RBP16.76■□□□□ 0.27
VARS2-211ENST00000541562 KIAA0895Q8NCT3 520 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 SEMA6BQ9H3T3 888 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 RASSF7Q02833 373 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
VARS2-211ENST00000541562 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
VARS2-211ENST00000541562 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
VARS2-211ENST00000541562 DGKHQ86XP1 1220 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 TICAM2Q86XR7 235 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 P2RX5Q93086 422 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 FUT8Q9BYC5 575 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 RMND1Q9NWS8 449 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 ZRANB2O95218 330 aaKnown RBP eCLIP16.75■□□□□ 0.27
VARS2-211ENST00000541562 BMP15O95972 392 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 PBX1P40424 430 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
VARS2-211ENST00000541562 POTEB3A0JP26 581 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 POTECB2RU33 542 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 POTEBQ6S5H4 581 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 SV2BQ7L1I2 683 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 DDX12PQ92771 950 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms