RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 CFAP61Q8NHU2 1237 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 TPX2Q9ULW0 747 aaKnown RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 SOS2Q07890 1332 aaPredicted RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 DDAH1O94760 285 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 PTPREP23469 700 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 LTKP29376 864 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 GGCXP38435 758 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 MTF1Q14872 753 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 ADGRG1Q9Y653 693 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 TNNI1P19237 187 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 CCNE1P24864 410 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 TRPC3Q13507 836 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 MCTP2Q6DN12 878 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 DHX40Q8IX18 779 aaKnown RBP13.17□□□□□ -0.3
EIF3A-203ENST00000541549 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 POC1B-GALNT4F8VUJ3 575 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 TADA3O75528 432 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 LGSNQ5TDP6 509 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 EMBQ6PCB8 327 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 AP1M1Q9BXS5 423 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
EIF3A-203ENST00000541549 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 ALS2CLQ60I27 953 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 AP1ARQ63HQ0 302 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 PALM2Q8IXS6 379 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
EIF3A-203ENST00000541549 PCDHA13Q9Y5I0 950 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 GAS7O60861 476 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 LIFRP42702 1097 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
EIF3A-203ENST00000541549 DPF2Q92785 391 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 P3H4Q92791 437 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 HDAC6Q9UBN7 1215 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 TRIM66O15016 1216 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 IQCB1Q15051 598 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
EIF3A-203ENST00000541549 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
EIF3A-203ENST00000541549 CIAO1O76071 339 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 LRRD1A4D1F6 860 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 FOXN1O15353 648 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 LRRN2O75325 713 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
EIF3A-203ENST00000541549 CHRNDQ07001 517 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 TBC1D1Q86TI0 1168 aaPredicted RBP13.15□□□□□ -0.3
EIF3A-203ENST00000541549 SCYL3Q8IZE3 742 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 RUNDC3BQ96NL0 473 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 OPHN1O60890 802 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
EIF3A-203ENST00000541549 CCZ1BP86790 482 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
EIF3A-203ENST00000541549 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 STRN3Q13033 797 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
EIF3A-203ENST00000541549 SMIM24O75264 130 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 ATF2P15336 505 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 VSNL1P62760 191 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 CUL4BQ13620 913 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 SPATS2LQ9NUQ6 558 aaKnown RBP13.14□□□□□ -0.31
EIF3A-203ENST00000541549 BZW2Q9Y6E2 419 aaKnown RBP13.14□□□□□ -0.31
EIF3A-203ENST00000541549 METP08581 1390 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 ERVV-2B6SEH9 535 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 PLCG1P19174 1290 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 MAN1A1P33908 653 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 KAZNQ674X7 775 aa13.14□□□□□ -0.31
EIF3A-203ENST00000541549 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms