RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 CDC23Q9UJX2 597 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 KCNH4Q9UQ05 1017 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 GAKO14976 1311 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 ZMYM6O95789 1325 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 ZNF213O14771 459 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 CLSTN1O94985 981 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 XBP1P17861 261 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 BTDP43251 543 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 RPAINQ86UA6 219 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 SPATS2Q86XZ4 545 aaKnown RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 PICK1Q9NRD5 415 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
CHFR-219ENST00000541341 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
CHFR-219ENST00000541341 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 BCRP11274 1271 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 PTPRAP18433 802 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 HOXD10P28358 340 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 ADD2P35612 726 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 MAGEA9P43362 315 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 FCGRTP55899 365 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 MECOMQ03112 1051 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 ARID5BQ14865 1188 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 UBE3CQ15386 1083 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 LONRF2Q1L5Z9 754 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 NOL9Q5SY16 702 aaKnown RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 CCDC12Q8WUD4 166 aaPredicted RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 FUT8Q9BYC5 575 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 LRP2BPQ9P2M1 347 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHFR-219ENST00000541341 FEZ2Q9UHY8 353 aaPredicted RBP11.69□□□□□ -0.54
CHFR-219ENST00000541341 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
CHFR-219ENST00000541341 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 KLF18A0A0U1RQI7 1052 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 CTAGE15A4D2H0 777 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 VWA3AA6NCI4 1184 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 PRC1O43663 620 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 ADCY3O60266 1144 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 GNRH1P01148 92 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 CTAGE8P0CG41 777 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 PDE6AP16499 860 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 PRMT2P55345 433 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 GSTO1P78417 241 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 CTAGE6Q86UF2 777 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 CTAGE4Q8IX94 777 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 APPBP2Q92624 585 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
CHFR-219ENST00000541341 MYH8P13535 1937 aa11.68□□□□□ -0.54
CHFR-219ENST00000541341 MROH7-TTC4A0A0A0MT08 1334 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 TNPO2O14787 897 aaKnown RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 PEX10O60683 326 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 INHAP05111 366 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 LDHCP07864 332 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 GJA8P48165 433 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 FLT3LGP49771 235 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 UBXN2AP68543 259 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 PDILTQ8N807 584 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 SMCR8Q8TEV9 937 aaPredicted RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
CHFR-219ENST00000541341 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
CHFR-219ENST00000541341 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms