RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 LRRC37A2A6NM11 1700 aa28.23■■■□□ 2.11
LEMD3-203ENST00000541171 RASIP1Q5U651 963 aa28.22■■■□□ 2.11
LEMD3-203ENST00000541171 SLC30A10Q6XR72 485 aa28.22■■■□□ 2.11
LEMD3-203ENST00000541171 TBC1D10CQ8IV04 446 aa28.22■■■□□ 2.11
LEMD3-203ENST00000541171 WDR11Q9BZH6 1224 aa28.22■■■□□ 2.11
LEMD3-203ENST00000541171 B4GALT4O60513 344 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 FGBP02675 491 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 DUSP28Q4G0W2 176 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 RNF207Q6ZRF8 634 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 CLEC4DQ8WXI8 215 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 EYSQ5T1H1 3165 aa28.21■■■□□ 2.11
LEMD3-203ENST00000541171 ZMYM6O95789 1325 aa28.2■■■□□ 2.11
LEMD3-203ENST00000541171 LCTP09848 1927 aa28.2■■■□□ 2.11
LEMD3-203ENST00000541171 ZNF543Q08ER8 600 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 TICAM2Q86XR7 235 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 TTC14Q96N46 770 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 ZKSCAN3Q9BRR0 538 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 SEZ6LQ9BYH1 1024 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 CDH23Q9H251 3354 aa28.2■■■□□ 2.1
LEMD3-203ENST00000541171 MYL3P08590 195 aa28.19■■■□□ 2.1
LEMD3-203ENST00000541171 HERVK_113Q902F9 699 aa28.19■■■□□ 2.1
LEMD3-203ENST00000541171 NOC4LQ9BVI4 516 aaKnown RBP28.19■■■□□ 2.1
LEMD3-203ENST00000541171 CXXC1Q9P0U4 656 aaPredicted RBP28.19■■■□□ 2.1
LEMD3-203ENST00000541171 GOLGA8HP0CJ92 632 aa28.18■■■□□ 2.1
LEMD3-203ENST00000541171 SDSP20132 328 aa28.18■■■□□ 2.1
LEMD3-203ENST00000541171 OTOP2Q7RTS6 562 aa28.18■■■□□ 2.1
LEMD3-203ENST00000541171 OR6J1Q8NGC5 347 aa28.18■■■□□ 2.1
LEMD3-203ENST00000541171 MTIF3Q9H2K0 278 aaKnown RBP28.18■■■□□ 2.1
LEMD3-203ENST00000541171 RNF41Q9H4P4 317 aaPredicted RBP28.18■■■□□ 2.1
LEMD3-203ENST00000541171 PCP11498 1178 aaKnown RBP28.17■■■□□ 2.1
LEMD3-203ENST00000541171 MFAP1P55081 439 aaKnown RBP28.17■■■□□ 2.1
LEMD3-203ENST00000541171 RPS6P62753 249 aaKnown RBP28.17■■■□□ 2.1
LEMD3-203ENST00000541171 PDE4DQ08499 809 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 USP38Q8NB14 1042 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 ESR2Q92731 530 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 ALDH8A1Q9H2A2 487 aaPredicted RBP28.17■■■□□ 2.1
LEMD3-203ENST00000541171 CPVLQ9H3G5 476 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 PRDM12Q9H4Q4 367 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 POLR3EQ9NVU0 708 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 MSRAQ9UJ68 235 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 PNMA2Q9UL42 364 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 NEDD4P46934 1319 aa28.17■■■□□ 2.1
LEMD3-203ENST00000541171 LOC102724159A0A0B4J2E5 919 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 ZNF213O14771 459 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 PWP2Q15269 919 aaKnown RBP28.16■■■□□ 2.1
LEMD3-203ENST00000541171 USH1GQ495M9 461 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 PPM1EQ8WY54 764 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 SCLYQ96I15 445 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 GAS2L1Q99501 681 aaPredicted RBP28.16■■■□□ 2.1
LEMD3-203ENST00000541171 UBA5Q9GZZ9 404 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 WNT8AQ9H1J5 351 aa28.16■■■□□ 2.1
LEMD3-203ENST00000541171 RWDD1Q9H446 243 aaPredicted RBP28.16■■■□□ 2.1
LEMD3-203ENST00000541171 GPHNQ9NQX3 736 aaPredicted RBP28.16■■■□□ 2.1
LEMD3-203ENST00000541171 TRMT13Q9NUP7 481 aaKnown RBP28.16■■■□□ 2.1
LEMD3-203ENST00000541171 RBM47A0AV96 593 aaKnown RBP28.15■■■□□ 2.1
LEMD3-203ENST00000541171 SNHG28P0DPA3 235 aa28.15■■■□□ 2.1
LEMD3-203ENST00000541171 CPT1AP50416 773 aa28.15■■■□□ 2.1
LEMD3-203ENST00000541171 MPHOSPH6Q99547 160 aaKnown RBP28.15■■■□□ 2.1
LEMD3-203ENST00000541171 PRUNE2Q8WUY3 3088 aa28.15■■■□□ 2.1
LEMD3-203ENST00000541171 CYP2C9P11712 490 aa28.14■■■□□ 2.1
LEMD3-203ENST00000541171 PURAQ00577 322 aaKnown RBP28.14■■■□□ 2.1
LEMD3-203ENST00000541171 RAB30Q15771 203 aa28.14■■■□□ 2.1
LEMD3-203ENST00000541171 CWC27Q6UX04 472 aaKnown RBP28.14■■■□□ 2.1
LEMD3-203ENST00000541171 SMC5Q8IY18 1101 aa28.14■■■□□ 2.1
LEMD3-203ENST00000541171 PPP1R13LQ8WUF5 828 aa28.14■■■□□ 2.1
LEMD3-203ENST00000541171 NKX2-4Q9H2Z4 354 aa28.14■■■□□ 2.1
LEMD3-203ENST00000541171 WDR19Q8NEZ3 1342 aa28.14■■■□□ 2.09
LEMD3-203ENST00000541171 PPP2R5BQ15173 497 aa28.13■■■□□ 2.09
LEMD3-203ENST00000541171 FAM47CQ5HY64 1035 aa28.13■■■□□ 2.09
LEMD3-203ENST00000541171 GPATCH4Q5T3I0 446 aaKnown RBP28.13■■■□□ 2.09
LEMD3-203ENST00000541171 CHD1LQ86WJ1 897 aa28.13■■■□□ 2.09
LEMD3-203ENST00000541171 PLEKHM2Q8IWE5 1019 aa28.13■■■□□ 2.09
LEMD3-203ENST00000541171 RPUSD2Q8IZ73 545 aaKnown RBP28.13■■■□□ 2.09
LEMD3-203ENST00000541171 COPS5Q92905 334 aa28.13■■■□□ 2.09
LEMD3-203ENST00000541171 MTG1Q9BT17 334 aaPredicted RBP28.13■■■□□ 2.09
LEMD3-203ENST00000541171 BRDTQ58F21 947 aaPredicted RBP28.12■■■□□ 2.09
LEMD3-203ENST00000541171 DGKHQ86XP1 1220 aa28.12■■■□□ 2.09
LEMD3-203ENST00000541171 DIAPH3Q9NSV4 1193 aa28.12■■■□□ 2.09
LEMD3-203ENST00000541171 TNKSO95271 1327 aa28.12■■■□□ 2.09
LEMD3-203ENST00000541171 ZBBXA8MT70 800 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 KDM4AO75164 1064 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 IGHDP01880 384 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 SUPT20HL2P0C7V6 817 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 PNMA1Q8ND90 353 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 DNERQ8NFT8 737 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 SCFD2Q8WU76 684 aa28.11■■■□□ 2.09
LEMD3-203ENST00000541171 YTHDC1Q96MU7 727 aaKnown RBP28.11■■■□□ 2.09
LEMD3-203ENST00000541171 YBX2Q9Y2T7 364 aaKnown RBP28.11■■■□□ 2.09
LEMD3-203ENST00000541171 B4DLN1 442 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 NKRFO15226 690 aaKnown RBP eCLIP28.1■■■□□ 2.09
LEMD3-203ENST00000541171 TXNP10599 105 aaKnown RBP28.1■■■□□ 2.09
LEMD3-203ENST00000541171 EDNRBP24530 442 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 MRPL12P52815 198 aaKnown RBP28.1■■■□□ 2.09
LEMD3-203ENST00000541171 RABGGTBP53611 331 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 NBPF20Q3BBV1 942 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 IQCA1Q86XH1 822 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 KAT14Q9H8E8 782 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 SLC28A3Q9HAS3 691 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 PRDM6Q9NQX0 595 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 SLC4A7Q9Y6M7 1214 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms