RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NAP1L1P55209 391 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 MEA1Q16626 185 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 FAM153CQ494X1 144 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 TTC31Q49AM3 519 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 CABP7Q86V35 215 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 TRIM9Q9C026 710 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 FAM153AQ9UHL3 310 aa11.55□□□□□ -0.56
CDC42SE1-207ENST00000540998 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 FLT1P17948 1338 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 EXOC5O00471 708 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 CYLC1P35663 651 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 IRAK1P51617 712 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 GUCY2FP51841 1108 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 CORO7P57737 925 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 GNGT1P63211 74 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 RASSF7Q02833 373 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TUBB2AQ13885 445 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 CT47A1Q5JQC4 288 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 FBXW10Q5XX13 1052 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TUBB2BQ9BVA1 445 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TSPYL1Q9H0U9 437 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 ZNHIT6Q9NWK9 470 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TBC1D7Q9P0N9 293 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 ARAP2Q8WZ64 1704 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 PPFIA4O75335 1185 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TXKP42681 527 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 SLC1A4P43007 532 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 KIF11P52732 1056 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 KRT83P78385 493 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 CAVIN4Q5BKX8 364 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 SPATA4Q8NEY3 305 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 ACBD3Q9H3P7 528 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 BIN2Q9UBW5 565 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
CDC42SE1-207ENST00000540998 KCNQ2O43526 872 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 FTCDO95954 541 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 CALM1P0DP23 149 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 CALM2P0DP24 149 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 CALM3P0DP25 149 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 MAGEA9P43362 315 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 ZBED6P86452 979 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 USP17L2Q6R6M4 530 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 BCAS4Q8TDM0 211 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 IFT81Q8WYA0 676 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 THAP9Q9H5L6 903 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 A0A1W2PQC6 194 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 POTEMA6NI47 508 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 AKR1B10O60218 316 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 ZEB2O60315 1214 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 VAV2P52735 878 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 AENQ8WTP8 325 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 OSBPL9Q96SU4 736 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 EP400Q96L91 3159 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 RPS6KA5O75582 802 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 SPA17Q15506 151 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 FGFBP2Q9BYJ0 223 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
CDC42SE1-207ENST00000540998 GRIN2DO15399 1336 aa11.52□□□□□ -0.56
CDC42SE1-207ENST00000540998 M0R2N6 131 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 STXBP3O00186 592 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 BACH1O14867 736 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 GLI1P08151 1106 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 MAP9Q49MG5 647 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 KCNK18Q7Z418 384 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 IPO4Q8TEX9 1081 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 A0A1B0GUL6 1792 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 LOC102724428A0A0B4J2F2 783 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 CCNE1P24864 410 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 TRAPPC10P48553 1259 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms