RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 NLRP5P59047 1200 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 CCDC173Q0VFZ6 552 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 UVSSAQ2YD98 709 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 GALNT17Q6IS24 598 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 FAM43AQ8N2R8 423 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 ZNF713Q8N859 430 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 ANP32BQ92688 251 aaKnown RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 COA7Q96BR5 231 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 ZIC5Q96T25 663 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 FBXO2Q9UK22 296 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-204ENST00000540846 PCDHB6Q9Y5E3 794 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 LCTP09848 1927 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMAD3-204ENST00000540846 BMP15O95972 392 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 FDX1P10109 184 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 PTPREP23469 700 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 SHC4Q6S5L8 630 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 CCDC102AQ96A19 550 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
SMAD3-204ENST00000540846 PCDHA4Q9UN74 947 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 MRVI1Q9Y6F6 885 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ESYT2A0FGR8 921 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-204ENST00000540846 M0R2N6 131 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ATP2A1O14983 1001 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ICAM1P05362 532 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 HERVK_113P62684 666 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 TMEM132BQ14DG7 1078 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 CYP4F22Q6NT55 531 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-204ENST00000540846 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
SMAD3-204ENST00000540846 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 AMNQ9BXJ7 453 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ZMYND12Q9H0C1 365 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 HOXC10Q9NYD6 342 aa14.22□□□□□ -0.13
SMAD3-204ENST00000540846 ADGRA2Q96PE1 1338 aa14.21□□□□□ -0.13
SMAD3-204ENST00000540846 PDHXO00330 501 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 PEX10O60683 326 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 CNMDO75829 334 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 IRX3P78415 501 aaPredicted RBP14.21□□□□□ -0.14
SMAD3-204ENST00000540846 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.14
SMAD3-204ENST00000540846 CCDC174Q6PII3 467 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 FAM200AQ8TCP9 573 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 CCDC12Q8WUD4 166 aaPredicted RBP14.21□□□□□ -0.14
SMAD3-204ENST00000540846 PDLIM2Q96JY6 352 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 BTBD7Q9P203 1132 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 PCDHA1Q9Y5I3 950 aa14.21□□□□□ -0.14
SMAD3-204ENST00000540846 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.14
SMAD3-204ENST00000540846 ZNF202O95125 648 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 CAVIN2O95810 425 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 OAZ1P54368 228 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 NAPAP54920 295 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMAD3-204ENST00000540846 USH1GQ495M9 461 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 TTC38Q5R3I4 469 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 CLIC6Q96NY7 704 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 RAVER2Q9HCJ3 691 aaKnown RBP14.2□□□□□ -0.14
SMAD3-204ENST00000540846 TXNRD2Q9NNW7 524 aa14.2□□□□□ -0.14
SMAD3-204ENST00000540846 MYH7BA7E2Y1 1941 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 WNT7AO00755 349 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 CYP2C8P10632 490 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 SYKP43405 635 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 PIK3AP1Q6ZUJ8 805 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 MB21D1Q8N884 522 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 CLEC4DQ8WXI8 215 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 CAPNS2Q96L46 248 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 ZCCHC17Q9NP64 241 aaKnown RBP14.19□□□□□ -0.14
SMAD3-204ENST00000540846 RBPJLQ9UBG7 517 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 RIPK3Q9Y572 518 aa14.19□□□□□ -0.14
SMAD3-204ENST00000540846 ZBED4O75132 1171 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 ATP2B1P20020 1258 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 OSBPP22059 807 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 TM4SF4P48230 202 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
SMAD3-204ENST00000540846 HTRA3P83110 453 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 GHRHRQ02643 423 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 STX1AQ16623 288 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 ANO6Q4KMQ2 910 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 CPXCR1Q8N123 301 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 FERMT2Q96AC1 680 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 SDF4Q9BRK5 362 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 RIC8AQ9NPQ8 531 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 PNMA3Q9UL41 463 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 CCPG1Q9ULG6 757 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 ABCB11O95342 1321 aa14.18□□□□□ -0.14
SMAD3-204ENST00000540846 SMCO2A6NFE2 343 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms