RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 FAM160A1Q05DH4 1040 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ZNF174Q15697 407 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 L1TD1Q5T7N2 865 aaKnown RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 FSIP1Q8NA03 581 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ENGASEQ8NFI3 743 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 SLC10A4Q96EP9 437 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 FBXO28Q9NVF7 368 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 RBBP6Q7Z6E9 1792 aaKnown RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 MANSC4A6NHS7 340 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 NR1I2O75469 434 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 FDX1P10109 184 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 HMGCS2P54868 508 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 AP3B2Q13367 1082 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 USH1GQ495M9 461 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 NEK8Q86SG6 692 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 ABCB11O95342 1321 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 FLOT1O75955 427 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 MCM7P33993 719 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 PPATQ06203 517 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 UBE2SQ16763 222 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 RESP18Q5W5W9 173 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 ARL6IP4Q66PJ3 421 aaKnown RBP16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 SHC4Q6S5L8 630 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
CYB561A3-216ENST00000540755 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 LAD1O00515 517 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 MEIS2O14770 477 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 ICAM1P05362 532 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 PTGDRQ13258 359 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 ERO1BQ86YB8 467 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 FMR1NBQ8N0W7 255 aaPredicted RBP16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 C4orf32Q8N8J7 132 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 CLIC6Q96NY7 704 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 CLSTN2Q9H4D0 955 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 HPSEQ9Y251 543 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 MRPL11Q9Y3B7 192 aaKnown RBP16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 CENPFP49454 3210 aa16.2■□□□□ 0.18
CYB561A3-216ENST00000540755 ZNF536O15090 1300 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 SYCE3A1L190 88 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 SPDYE5A6NIY4 337 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 OPLAHO14841 1288 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 FKTNO75072 461 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 ALDH1A1P00352 501 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 PFKFB1P16118 471 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 NDUFA8P51970 172 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L11C9JVI0 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L18D6R9N7 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L22D6RA61 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L17D6RBQ6 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L19D6RCP7 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L20D6RJB6 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 PRPHP41219 470 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 INHBEP58166 350 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 GRIN1Q05586 938 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L24Q0WX57 530 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 USP17L6PQ6QN14 398 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 CATSPERGQ6ZRH7 1159 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 PTPN18Q99952 460 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 ELP3Q9H9T3 547 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 FAM13BQ9NYF5 915 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
CYB561A3-216ENST00000540755 TESPA1A2RU30 521 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 CXCL11O14625 94 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 ZBED4O75132 1171 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 DSG3P32926 999 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 PPIL2Q13356 520 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms