RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 BANK1Q8NDB2 785 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 ATOH1Q92858 354 aaPredicted RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 POP1Q99575 1024 aaKnown RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSPN-207ENST00000540266 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 ASB14A6NK59 587 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 CXCL10P02778 98 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 BFSP2Q13515 415 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 PTPROQ16827 1216 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 NBPF20Q3BBV1 942 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 TIGD5Q53EQ6 642 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 SUGP1Q8IWZ8 645 aaKnown RBP12.48□□□□□ -0.41
SSPN-207ENST00000540266 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
SSPN-207ENST00000540266 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
SSPN-207ENST00000540266 VPS13AQ96RL7 3174 aa12.48□□□□□ -0.41
SSPN-207ENST00000540266 PARP14Q460N5 1801 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 ABHD14A-ACY1A0A1B0GW23 586 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 ZBED4O75132 1171 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 KRT37O76014 449 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 GNAI3P08754 354 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 ID4P47928 161 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 CDK8P49336 464 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 OAZ1P54368 228 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
SSPN-207ENST00000540266 ZXDAP98168 799 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 DUSP28Q4G0W2 176 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
SSPN-207ENST00000540266 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
SSPN-207ENST00000540266 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
SSPN-207ENST00000540266 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 MYH1P12882 1939 aa12.47□□□□□ -0.41
SSPN-207ENST00000540266 CACNA1BQ00975 2339 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 PRR23AA6NEV1 266 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 USP17L21D6R901 530 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 F5H6K3 240 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 H3BNC9 293 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 MBTPS2O43462 519 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 NCK2O43639 380 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 NBNO60934 754 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 AVPR2P30518 371 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 SLC4A3P48751 1232 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 HTRA4P83105 476 aaPredicted RBP12.46□□□□□ -0.41
SSPN-207ENST00000540266 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
SSPN-207ENST00000540266 KLRC3Q07444 240 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 DLX2Q07687 328 aaPredicted RBP12.46□□□□□ -0.41
SSPN-207ENST00000540266 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 C12orf60Q5U649 245 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 AFAP1L1Q8TED9 768 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 A1CFQ9NQ94 594 aaKnown RBP12.46□□□□□ -0.41
SSPN-207ENST00000540266 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SSPN-207ENST00000540266 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
SSPN-207ENST00000540266 DNAH14Q0VDD8 3507 aa12.46□□□□□ -0.42
SSPN-207ENST00000540266 KMT2BQ9UMN6 2715 aaPredicted RBP12.45□□□□□ -0.42
SSPN-207ENST00000540266 RGS20O76081 388 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 NBL1P41271 181 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 NUBP1P53384 320 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 FBXO16Q8IX29 292 aaPredicted RBP12.45□□□□□ -0.42
SSPN-207ENST00000540266 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 ASIC4Q96FT7 647 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
SSPN-207ENST00000540266 CLDND1Q9NY35 253 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
SSPN-207ENST00000540266 COL11A1P12107 1806 aaPredicted RBP12.45□□□□□ -0.42
SSPN-207ENST00000540266 GVINP1Q7Z2Y8 2422 aa12.45□□□□□ -0.42
SSPN-207ENST00000540266 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 H0Y858 1186 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 STXBP3O00186 592 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 NDUFB10O96000 172 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 MYL3P08590 195 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 SELPP16109 830 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 CPT1AP50416 773 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 RBL2Q08999 1139 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 CBX2Q14781 532 aaPredicted RBP12.44□□□□□ -0.42
SSPN-207ENST00000540266 FAM47CQ5HY64 1035 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 API5Q9BZZ5 524 aaKnown RBP12.44□□□□□ -0.42
SSPN-207ENST00000540266 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 TET1Q8NFU7 2136 aa12.44□□□□□ -0.42
SSPN-207ENST00000540266 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms