RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CFAP58Q5T655 872 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 TMTC1Q8IUR5 882 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 HAUS7Q99871 368 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 ZNF70Q9UC06 446 aaPredicted RBP9.66□□□□□ -0.86
DDB1-217ENST00000540166 BAIAP2L1Q9UHR4 511 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 FBXO3Q9UK99 471 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 SAR1BQ9Y6B6 198 aa9.66□□□□□ -0.86
DDB1-217ENST00000540166 LRRIQ3A6PVS8 624 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 ITGBL1O95965 494 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 CMA1P23946 247 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.863e-7■■□□□ 14.4
DDB1-217ENST00000540166 PRELPP51888 382 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 STX17P56962 302 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 MSANTD4Q8NCY6 345 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 RASSF8Q8NHQ8 419 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 COG1Q8WTW3 980 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 RPGRIP1Q96KN7 1286 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 HINFPQ9BQA5 517 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 SLF1Q9BQI6 1058 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 CNTNAP1P78357 1384 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 CCDC122Q5T0U0 273 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 FKBP15Q5T1M5 1219 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 MOB2Q70IA6 237 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 EGFL6Q8IUX8 553 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 RAET1EQ8TD07 263 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 MIEF2Q96C03 454 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 ZNF274Q96GC6 653 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 ALDH8A1Q9H2A2 487 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDB1-217ENST00000540166 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 PDCLQ13371 301 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 TSGA10IPQ3SY00 556 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 COL13A1Q5TAT6 717 aaPredicted RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
DDB1-217ENST00000540166 DSCC1Q9BVC3 393 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 AS3MTQ9HBK9 375 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 RAB21Q9UL25 225 aa9.65□□□□□ -0.86
DDB1-217ENST00000540166 ERICH2A1L162 156 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 RASSF10A6NK89 507 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 E7EVH7 732 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 KRT86O43790 486 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 VAV2P52735 878 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 MTF1Q14872 753 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 ARFGAP2Q8N6H7 521 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 MLKLQ8NB16 471 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
DDB1-217ENST00000540166 PRMT6Q96LA8 375 aaPredicted RBP9.64□□□□□ -0.87
DDB1-217ENST00000540166 RIPOR2Q9Y4F9 1068 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 SEMA3EO15041 775 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 EIF3HO15372 352 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDB1-217ENST00000540166 PAX7P23759 505 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 GTF2A2P52657 109 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 SNAPC2Q13487 334 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 STOX1Q6ZVD7 989 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 PAIP2Q9BPZ3 127 aaKnown RBP9.64□□□□□ -0.87
DDB1-217ENST00000540166 MRPL44Q9H9J2 332 aaKnown RBP9.64□□□□□ -0.87
DDB1-217ENST00000540166 SERPINA10Q9UK55 444 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 IVNS1ABPQ9Y6Y0 642 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 ENC1O14682 589 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 CETPP11597 493 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 CRYMQ14894 314 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 CYP26C1Q6V0L0 522 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 TRIM22Q8IYM9 498 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 PCDHA5Q9Y5H7 936 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
DDB1-217ENST00000540166 HPDP32754 393 aaPredicted RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 FOXO4P98177 505 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 TTF1Q15361 905 aaPredicted RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 TBC1D31Q96DN5 1066 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 KAZALD1Q96I82 304 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SELENOOQ9BVL4 669 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 GOLGA8AA7E2F4 631 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SPA17Q15506 151 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 CTU1Q7Z7A3 348 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 NOA1Q8NC60 698 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 ACRBPQ8NEB7 543 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SH3GL3Q99963 347 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 PPANQ9NQ55 473 aaKnown RBP9.63□□□□□ -0.87
DDB1-217ENST00000540166 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 HPCAL4Q9UM19 191 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 POTECB2RU33 542 aa9.63□□□□□ -0.87
DDB1-217ENST00000540166 KLRK1P26718 216 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms