RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CAMK4Q16566 473 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 TBC1D10BQ4KMP7 808 aaPredicted RBP11.04□□□□□ -0.64
MDH1-215ENST00000539945 RESP18Q5W5W9 173 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 PIK3AP1Q6ZUJ8 805 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 HOMER1Q86YM7 354 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
MDH1-215ENST00000539945 TEPSINQ96N21 525 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 RBSNQ9H1K0 784 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 FBXO2Q9UK22 296 aaPredicted RBP11.04□□□□□ -0.64
MDH1-215ENST00000539945 ZBTB21Q9ULJ3 1066 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 TMX2Q9Y320 296 aa11.04□□□□□ -0.64
MDH1-215ENST00000539945 SRPRBQ9Y5M8 271 aaKnown RBP11.04□□□□□ -0.64
MDH1-215ENST00000539945 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 ZBTB5O15062 677 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
MDH1-215ENST00000539945 TTC38Q5R3I4 469 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 GPRC5DQ9NZD1 345 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 HACL1Q9UJ83 578 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 PCDHA6Q9UN73 950 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 HPSEQ9Y251 543 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 SBF1O95248 1867 aa11.03□□□□□ -0.64
MDH1-215ENST00000539945 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 USP17L10C9JJH3 530 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 NDUFB10O96000 172 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 ASNSP08243 561 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 CCDC192P0DO97 292 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 PFKFB1P16118 471 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 ATP2B1P20020 1258 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 SLC16A2P36021 539 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 BTNL9Q6UXG8 535 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 KRT25Q7Z3Z0 450 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 FERMT2Q96AC1 680 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 TIGD1Q96MW7 591 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 DEFB129Q9H1M3 183 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 GOPCQ9HD26 462 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 AAASQ9NRG9 546 aa11.02□□□□□ -0.64
MDH1-215ENST00000539945 WNT7AO00755 349 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 RAD21O60216 631 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 PPP1R11O60927 126 aaPredicted RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 ZNF202O95125 648 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 BMP3P12645 472 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 ATP2C1P98194 919 aaPredicted RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 ZNF174Q15697 407 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 CLIC6Q96NY7 704 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 CTNND1O60716 968 aaKnown RBP11.01□□□□□ -0.65
MDH1-215ENST00000539945 ECE1P42892 770 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 SYKP43405 635 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 ADCY7P51828 1080 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 PTGDRQ13258 359 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 ILDR2Q71H61 639 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 ACER1Q8TDN7 264 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 COA7Q96BR5 231 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 HOOK2Q96ED9 719 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 GLT8D2Q9H1C3 349 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 RIC8AQ9NPQ8 531 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 KCNH3Q9ULD8 1083 aa11.01□□□□□ -0.65
MDH1-215ENST00000539945 TMEM232C9JQI7 657 aa11□□□□□ -0.65
MDH1-215ENST00000539945 PLA2G6O60733 806 aa11□□□□□ -0.65
MDH1-215ENST00000539945 CFHP08603 1231 aa11□□□□□ -0.65
MDH1-215ENST00000539945 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.659e-10■□□□□ 10.5
MDH1-215ENST00000539945 MCM7P33993 719 aa11□□□□□ -0.65
MDH1-215ENST00000539945 MRPL12P52815 198 aaKnown RBP11□□□□□ -0.65
MDH1-215ENST00000539945 GRIN1Q05586 938 aa11□□□□□ -0.65
MDH1-215ENST00000539945 TYRO3Q06418 890 aa11□□□□□ -0.65
MDH1-215ENST00000539945 ORC2Q13416 577 aaPredicted RBP11□□□□□ -0.65
MDH1-215ENST00000539945 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.65
MDH1-215ENST00000539945 INF2Q27J81 1249 aa11□□□□□ -0.65
MDH1-215ENST00000539945 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
MDH1-215ENST00000539945 SYDE2Q5VT97 1194 aa11□□□□□ -0.65
MDH1-215ENST00000539945 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
MDH1-215ENST00000539945 DCAF15Q66K64 600 aa11□□□□□ -0.65
MDH1-215ENST00000539945 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
MDH1-215ENST00000539945 SASS6Q6UVJ0 657 aa11□□□□□ -0.65
MDH1-215ENST00000539945 ELOA2Q8IYF1 753 aaPredicted RBP11□□□□□ -0.65
MDH1-215ENST00000539945 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
MDH1-215ENST00000539945 C4orf32Q8N8J7 132 aa11□□□□□ -0.65
MDH1-215ENST00000539945 TRPM4Q8TD43 1214 aa11□□□□□ -0.65
MDH1-215ENST00000539945 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
MDH1-215ENST00000539945 PANK2Q9BZ23 570 aa11□□□□□ -0.65
MDH1-215ENST00000539945 TMEM134Q9H6X4 195 aa11□□□□□ -0.65
MDH1-215ENST00000539945 VCPKMTQ9H867 229 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms