RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SAMD7Q7Z3H4 446 aa19.36■□□□□ 0.69
LTBR-207ENST00000539925 DRC7Q8IY82 874 aa19.36■□□□□ 0.69
LTBR-207ENST00000539925 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
LTBR-207ENST00000539925 STK17AQ9UEE5 414 aa19.36■□□□□ 0.69
LTBR-207ENST00000539925 MRPL11Q9Y3B7 192 aaKnown RBP19.36■□□□□ 0.69
LTBR-207ENST00000539925 ZNF541Q9H0D2 1346 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 SHTN1A0MZ66 631 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 TBX3O15119 743 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 FDX1P10109 184 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 NCAPHQ15003 741 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 SLFN12Q8IYM2 578 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 SPICE1Q8N0Z3 855 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 MBOAT7Q96N66 472 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 LRRC27Q9C0I9 530 aa19.35■□□□□ 0.69
LTBR-207ENST00000539925 ABCB11O95342 1321 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 MEIS2O14770 477 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 MARCH6O60337 910 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 CLCN1P35523 988 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 PRELPP51888 382 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 KARSQ15046 597 aaKnown RBP19.34■□□□□ 0.69
LTBR-207ENST00000539925 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 SAMD3Q8N6K7 520 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 AS3MTQ9HBK9 375 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
LTBR-207ENST00000539925 SREBF1P36956 1147 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 PPP1R2P41236 205 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 KCNB1Q14721 858 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 KRT79Q5XKE5 535 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 CDAN1Q8IWY9 1227 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 KBTBD4Q9NVX7 518 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 ZNF112Q9UJU3 913 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.69
LTBR-207ENST00000539925 PITPNM2Q9BZ72 1349 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 A0A087WWV3 80 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 TDP2O95551 362 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 EGFRP00533 1210 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 TECP42680 631 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 TXKP42681 527 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 GRAMD1CQ8IYS0 662 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 WDR18Q9BV38 432 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 IMPACTQ9P2X3 320 aa19.33■□□□□ 0.68
LTBR-207ENST00000539925 USP17L15C9J2P7 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L13C9JLJ4 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L11C9JVI0 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L18D6R9N7 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L22D6RA61 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L17D6RBQ6 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L19D6RCP7 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L20D6RJB6 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 ZNF500O60304 480 aaPredicted RBP19.32■□□□□ 0.68
LTBR-207ENST00000539925 CYP3A4P08684 503 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 BMP6P22004 513 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 CIITAP33076 1130 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 ARHGAP4P98171 946 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L24Q0WX57 530 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 SUPT20HL1Q3ZLR7 823 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 ISM2Q6H9L7 571 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 PRPF38AQ8NAV1 312 aaKnown RBP19.32■□□□□ 0.68
LTBR-207ENST00000539925 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 KDM3AQ9Y4C1 1321 aa19.32■□□□□ 0.68
LTBR-207ENST00000539925 DICER1Q9UPY3 1922 aaKnown RBP19.31■□□□□ 0.68
LTBR-207ENST00000539925 SLC37A4O43826 429 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 RPN1P04843 607 aaKnown RBP19.31■□□□□ 0.68
LTBR-207ENST00000539925 GSDMDP57764 484 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 USH1GQ495M9 461 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 Q4G0T1 1027 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 ZNF658Q5TYW1 1059 aaPredicted RBP19.31■□□□□ 0.68
LTBR-207ENST00000539925 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 CRYGNQ8WXF5 182 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 FAM20AQ96MK3 541 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 PICK1Q9NRD5 415 aa19.31■□□□□ 0.68
LTBR-207ENST00000539925 GCOM1H8Y6P7 765 aaPredicted RBP19.3■□□□□ 0.68
LTBR-207ENST00000539925 POLR2MP0CAP2 368 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 NAALADL2Q58DX5 795 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 KCTD17Q8N5Z5 321 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 KIFC2Q96AC6 838 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 NT5C3AQ9H0P0 336 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
LTBR-207ENST00000539925 MAP3K20Q9NYL2 800 aaKnown RBP19.3■□□□□ 0.68
LTBR-207ENST00000539925 PCDHA12Q9UN75 941 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 EDIL3O43854 480 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 PLCG1P19174 1290 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 LMOD1P29536 600 aaPredicted RBP19.3■□□□□ 0.68
LTBR-207ENST00000539925 STIM1Q13586 685 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 SLF1Q9BQI6 1058 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 KCNMB3Q9NPA1 279 aa19.3■□□□□ 0.68
LTBR-207ENST00000539925 ICAM1P05362 532 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 CDC25AP30304 524 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 NBPF12Q5TAG4 269 aaPredicted RBP19.29■□□□□ 0.68
LTBR-207ENST00000539925 ANGEL2Q5VTE6 544 aaKnown RBP19.29■□□□□ 0.68
LTBR-207ENST00000539925 SPATA1Q5VX52 437 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 SPC24Q8NBT2 197 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 C7orf25Q9BPX7 421 aa19.29■□□□□ 0.68
LTBR-207ENST00000539925 FHDC1Q9C0D6 1143 aaPredicted RBP19.29■□□□□ 0.68
LTBR-207ENST00000539925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
LTBR-207ENST00000539925 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
LTBR-207ENST00000539925 C19orf81C9J6K1 198 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms