RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FOXN1O15353 648 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 RAD21O60216 631 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 ASNSP08243 561 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPARC-209ENST00000539687 STAT2P52630 851 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 ZNF280AP59817 542 aaPredicted RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 IKQ13123 557 aaPredicted RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 TPD52L1Q16890 204 aaPredicted RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 KRT79Q5XKE5 535 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 LRRC8AQ8IWT6 810 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 SLFN12Q8IYM2 578 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 IGSF22Q8N9C0 903 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 COA7Q96BR5 231 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 ZBED3Q96IU2 234 aaPredicted RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 PRIMPOLQ96LW4 560 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 MTMR9Q96QG7 549 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 NT5C3AQ9H0P0 336 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 TMEM60Q9H2L4 133 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 KBTBD4Q9NVX7 518 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
SPARC-209ENST00000539687 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 ZBTB21Q9ULJ3 1066 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
SPARC-209ENST00000539687 CYP3A7-CYP3A51PA0A087WV96 503 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 BICDL2A1A5D9 508 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 SPDYE3A6NKU9 549 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
SPARC-209ENST00000539687 PSMA7O14818 248 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 GDF11O95390 407 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 TPM2P07951 284 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 ZNF18P17022 549 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 BMP6P22004 513 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 CYP3A7P24462 503 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 CXCL9Q07325 125 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 PAK1Q13153 545 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 KARSQ15046 597 aaKnown RBP11.44□□□□□ -0.58
SPARC-209ENST00000539687 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 TTBK2Q6IQ55 1244 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 FILIP1Q7Z7B0 1213 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 CLEC10AQ8IUN9 316 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 DPF2Q92785 391 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 VEZTQ9HBM0 779 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 KCND1Q9NSA2 647 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 FANCLQ9NW38 375 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 LRWD1Q9UFC0 647 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 PCDHAC2Q9Y5I4 1007 aa11.44□□□□□ -0.58
SPARC-209ENST00000539687 CNTNAP1P78357 1384 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 A0A087WWV3 80 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 H7C1D1 291 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 RHOBTB3O94955 611 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 TPM1P09493 284 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
SPARC-209ENST00000539687 SLC16A2P36021 539 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 TECP42680 631 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 CUL4BQ13620 913 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 COBLL1Q53SF7 1204 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 CNNM4Q6P4Q7 775 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 SV2BQ7L1I2 683 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 TMC6Q7Z403 805 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 FAM114A1Q8IWE2 563 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 GRAMD1CQ8IYS0 662 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 ERMNQ8TAM6 284 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 DHTKD1Q96HY7 919 aaPredicted RBP11.43□□□□□ -0.58
SPARC-209ENST00000539687 MBOAT7Q96N66 472 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
SPARC-209ENST00000539687 C7orf25Q9BPX7 421 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 ANO3Q9BYT9 981 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 VCPKMTQ9H867 229 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 TMEM260Q9NX78 707 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
SPARC-209ENST00000539687 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 ABCB11O95342 1321 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 PVALEFA0A1B0GWK0 134 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 FAM196BA6NMK8 535 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 TMEM232C9JQI7 657 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 ADAMTS3O15072 1205 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 FGFR1OPO95684 399 aaKnown RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 SKILP12757 684 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 PLCG1P19174 1290 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 CAP2P40123 477 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 TXKP42681 527 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 TRIM14Q14142 442 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 DCAF15Q66K64 600 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 FCHSD1Q86WN1 690 aa11.42□□□□□ -0.58
SPARC-209ENST00000539687 CACTINQ8WUQ7 758 aaKnown RBP11.42□□□□□ -0.58
SPARC-209ENST00000539687 LPAR1Q92633 364 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms