RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF263O14978 683 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 USO1O60763 962 aaKnown RBP10.77□□□□□ -0.68
CDH13-204ENST00000539548 LCA5LO95447 670 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 MYBL2P10244 700 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.68
CDH13-204ENST00000539548 GGCXP38435 758 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 MAGEA9P43362 315 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 AMPD3Q01432 767 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 CYP27A1Q02318 531 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 STK4Q13043 487 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 SLC10A5Q5PT55 438 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 CREG2Q8IUH2 290 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.68
CDH13-204ENST00000539548 LZTS2Q9BRK4 669 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 JADE2Q9NQC1 790 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 RSPH14Q9UHP6 348 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 FAM184BQ9ULE4 1060 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 PLAGL2Q9UPG8 496 aa10.77□□□□□ -0.68
CDH13-204ENST00000539548 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
CDH13-204ENST00000539548 CYTH3O43739 400 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
CDH13-204ENST00000539548 TACC1O75410 805 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 ZMYND10O75800 440 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 USP17L8P0C7I0 530 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 KRT25Q7Z3Z0 450 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 CELF1Q92879 486 aaKnown RBP10.77□□□□□ -0.69
CDH13-204ENST00000539548 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
CDH13-204ENST00000539548 OR52Z1P0C646 297 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 KLRK1P26718 216 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 PRDX5P30044 214 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 CORO7P57737 925 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 ASIC1P78348 528 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 TXNRD1Q16881 649 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 SPTY2D1Q68D10 685 aaPredicted RBP10.76□□□□□ -0.69
CDH13-204ENST00000539548 CENPPQ6IPU0 288 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 CNNM4Q6P4Q7 775 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 SMARCC1Q92922 1105 aaPredicted RBP10.76□□□□□ -0.69
CDH13-204ENST00000539548 ZMYND12Q9H0C1 365 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 PCDHA13Q9Y5I0 950 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 MYH10P35580 1976 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 FCER1AP12319 257 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 RPS8P62241 208 aaKnown RBP10.76□□□□□ -0.69
CDH13-204ENST00000539548 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 CCDC96Q2M329 555 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 RIN2Q8WYP3 895 aaPredicted RBP10.76□□□□□ -0.69
CDH13-204ENST00000539548 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
CDH13-204ENST00000539548 ANKRD2Q9GZV1 360 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 SEMA6BQ9H3T3 888 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 SH2D4AQ9H788 454 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 EFCC1Q9HA90 598 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 ARHGAP20Q9P2F6 1191 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
CDH13-204ENST00000539548 ABCB11O95342 1321 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 PJA2O43164 708 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 TCP1P17987 556 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 ORC2Q13416 577 aaPredicted RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 NONOQ15233 471 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDH13-204ENST00000539548 VWA3BQ502W6 1294 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 DNAJC21Q5F1R6 531 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 FAM76AQ8TAV0 307 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 EEF2KMTQ96G04 330 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 GDAP1L1Q96MZ0 367 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 SPZ1Q9BXG8 430 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 IFIH1Q9BYX4 1025 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 MKNK2Q9HBH9 465 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 USP17L3A6NCW0 530 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 USP17L4A6NCW7 530 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 FGFR1OPO95684 399 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 PLEKP08567 350 aaPredicted RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 EIF4A3P38919 411 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 CCDC84Q86UT8 332 aaPredicted RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 GSPT2Q8IYD1 628 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 KIAA0895Q8NCT3 520 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 SPATA4Q8NEY3 305 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 DYNLL2Q96FJ2 89 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 LRRC1Q9BTT6 524 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 MMTAG2Q9BU76 263 aaKnown RBP10.75□□□□□ -0.69
CDH13-204ENST00000539548 EDEM3Q9BZQ6 932 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 NDST4Q9H3R1 872 aa10.75□□□□□ -0.69
CDH13-204ENST00000539548 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA6CA6NDK9 693 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 RGL2O15211 777 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDH13-204ENST00000539548 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA6DP0CG33 693 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 TSPY3P0CV98 308 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 TSPY8P0CW00 308 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 KIF11P52732 1056 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 PPFIA1Q13136 1202 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 MAN2A1Q16706 1144 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 LETM2Q2VYF4 491 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms