RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MRPL12P52815 198 aaKnown RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 USH1GQ495M9 461 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 ZNF771Q7L3S4 317 aaPredicted RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 AMNQ9BXJ7 453 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 SH2D4AQ9H788 454 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L15C9J2P7 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L13C9JLJ4 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L11C9JVI0 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L18D6R9N7 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L22D6RA61 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L17D6RBQ6 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L19D6RCP7 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L20D6RJB6 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 FOXN1O15353 648 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 EDIL3O43854 480 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L24Q0WX57 530 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 PNOCQ13519 176 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 C9orf131Q5VYM1 1079 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 ARL6IP4Q66PJ3 421 aaKnown RBP19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP17L6PQ6QN14 398 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 SERTAD1Q9UHV2 236 aa19.31■□□□□ 0.68
PCDHB17P-201ENST00000539533 NYAP1Q6ZVC0 841 aa19.3■□□□□ 0.68
PCDHB17P-201ENST00000539533 FBXO11Q86XK2 927 aa19.3■□□□□ 0.68
PCDHB17P-201ENST00000539533 FILIP1Q7Z7B0 1213 aa19.3■□□□□ 0.68
PCDHB17P-201ENST00000539533 CEP57L1Q8IYX8 460 aa19.3■□□□□ 0.68
PCDHB17P-201ENST00000539533 BIN1O00499 593 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 CDC25AP30304 524 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 CCZ1BP86790 482 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 CCZ1P86791 482 aaPredicted RBP19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 DGKZQ13574 1117 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 ZKSCAN4Q969J2 545 aaPredicted RBP19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 FBXO28Q9NVF7 368 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 KIFC2Q96AC6 838 aa19.29■□□□□ 0.68
PCDHB17P-201ENST00000539533 ACTN4O43707 911 aaKnown RBP19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 MDM2Q00987 491 aaPredicted RBP19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 DLK2Q6UY11 383 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 DTHD1Q6ZMT9 781 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 AOPEPQ8N6M6 819 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 DHX58Q96C10 678 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 POLR2AP24928 1970 aaKnown RBP19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 ISM2Q6H9L7 571 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 GRAMD1CQ8IYS0 662 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 CHURC1Q8WUH1 139 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 WRNIP1Q96S55 665 aa19.28■□□□□ 0.68
PCDHB17P-201ENST00000539533 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.68
PCDHB17P-201ENST00000539533 MEIS2O14770 477 aa19.27■□□□□ 0.68
PCDHB17P-201ENST00000539533 LMOD1P29536 600 aaPredicted RBP19.27■□□□□ 0.68
PCDHB17P-201ENST00000539533 NAT10Q9H0A0 1025 aaKnown RBP19.27■□□□□ 0.68
PCDHB17P-201ENST00000539533 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
PCDHB17P-201ENST00000539533 TDP2O95551 362 aa19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 LONP1P36776 959 aaKnown RBP19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 TAF3Q5VWG9 929 aa19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 CCDC174Q6PII3 467 aa19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 POTEDQ86YR6 584 aa19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 BBXQ8WY36 941 aaPredicted RBP19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 TUBE1Q9UJT0 475 aa19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 DDX41Q9UJV9 622 aaKnown RBP19.27■□□□□ 0.67
PCDHB17P-201ENST00000539533 PP2D1A8MPX8 630 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 LAD1O00515 517 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 CCAR2Q8N163 923 aaKnown RBP19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 P2RX7Q99572 595 aaKnown RBP19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 GINM1Q9NU53 330 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 PCDHA5Q9Y5H7 936 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 OPLAHO14841 1288 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 SLC37A4O43826 429 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 OR52Z1P0C646 297 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 PRR29P0C7W0 189 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 KIAA1683Q9H0B3 1180 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 GLT8D2Q9H1C3 349 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 RANBP17Q9H2T7 1088 aaKnown RBP19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 KCND1Q9NSA2 647 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 TRMT1Q9NXH9 659 aaKnown RBP19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 FEM1BQ9UK73 627 aa19.26■□□□□ 0.67
PCDHB17P-201ENST00000539533 PLA2G6O60733 806 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 PRPHP41219 470 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 GSDMDP57764 484 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 MTMR2Q13614 643 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 PRKG1Q13976 671 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 POSTNQ15063 836 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 ELOA2Q8IYF1 753 aaPredicted RBP19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 SCYL3Q8IZE3 742 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 HOOK2Q96ED9 719 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 ZNF215Q9UL58 517 aaPredicted RBP19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 SPP2Q13103 211 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 FAM160B2Q86V87 743 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
PCDHB17P-201ENST00000539533 SSC5DA1L4H1 1573 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 SLFN14P0C7P3 912 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 NLRP12P59046 1061 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 GABPB1Q06547 395 aaPredicted RBP19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 PPP2R3BQ9Y5P8 575 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 MYH7BA7E2Y1 1941 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 PTPRAP18433 802 aa19.24■□□□□ 0.67
PCDHB17P-201ENST00000539533 KIF18AQ8NI77 898 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms