RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SH2B1Q9NRF2 756 aaPredicted RBP15□□□□□ -0.01
CCDC42-202ENST00000539522 GNRH1P01148 92 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 ELNP15502 786 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 HOXA13P31271 388 aaPredicted RBP14.99□□□□□ -0.01
CCDC42-202ENST00000539522 SSRP1Q08945 709 aaKnown RBP14.99□□□□□ -0.01
CCDC42-202ENST00000539522 NSMFQ6X4W1 530 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 DDX11Q96FC9 970 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 MAML3Q96JK9 1138 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 NUDT12Q9BQG2 462 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 VPS54Q9P1Q0 977 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 SEC63Q9UGP8 760 aaKnown RBP14.99□□□□□ -0.01
CCDC42-202ENST00000539522 FBXO40Q9UH90 709 aa14.99□□□□□ -0.01
CCDC42-202ENST00000539522 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
CCDC42-202ENST00000539522 K7ELQ4 463 aaPredicted RBP14.98□□□□□ -0.01
CCDC42-202ENST00000539522 M0R2N6 131 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 CPLX1O14810 134 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 EDIL3O43854 480 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 DEXIO95424 95 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
CCDC42-202ENST00000539522 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
CCDC42-202ENST00000539522 KCTD2Q14681 263 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 UBE2SQ16763 222 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 USP17L6PQ6QN14 398 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 RNF207Q6ZRF8 634 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 SOCS4Q8WXH5 440 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 TAAR1Q96RJ0 339 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 APBA2Q99767 749 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 KATNBL1Q9H079 304 aa14.98□□□□□ -0.01
CCDC42-202ENST00000539522 FRMPD4Q14CM0 1322 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 PIK3CDO00329 1044 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 CFBP00751 764 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 CALML3P27482 149 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 RGS2P41220 211 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 TRPV1Q8NER1 839 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 IL31RAQ8NI17 732 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 SH3TC2Q8TF17 1288 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 LLPHQ9BRT6 129 aaKnown RBP14.97□□□□□ -0.01
CCDC42-202ENST00000539522 MCOLN1Q9GZU1 580 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 ZMYND12Q9H0C1 365 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 TMEM260Q9NX78 707 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 ORC3Q9UBD5 711 aaPredicted RBP14.97□□□□□ -0.01
CCDC42-202ENST00000539522 PNMA2Q9UL42 364 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 IVNS1ABPQ9Y6Y0 642 aa14.97□□□□□ -0.01
CCDC42-202ENST00000539522 PFASO15067 1338 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 RPTORQ8N122 1335 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 MYH7BA7E2Y1 1941 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 ADCY3O60266 1144 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 SNAI1O95863 264 aaPredicted RBP14.96□□□□□ -0.01
CCDC42-202ENST00000539522 EDNRBP24530 442 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 NAPAP54920 295 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 PRMT2P55345 433 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 MAP3K21Q5TCX8 1036 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 PPP1R18Q6NYC8 613 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.01
CCDC42-202ENST00000539522 MAMDC4Q6UXC1 1216 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 CCAR1Q8IX12 1150 aaKnown RBP14.96□□□□□ -0.01
CCDC42-202ENST00000539522 MORC4Q8TE76 937 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 PHF20Q9BVI0 1012 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 RIC8AQ9NPQ8 531 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 KCNJ14Q9UNX9 436 aa14.96□□□□□ -0.01
CCDC42-202ENST00000539522 DIS3Q9Y2L1 958 aaKnown RBP14.96□□□□□ -0.01
CCDC42-202ENST00000539522 KIAA1217Q5T5P2 1943 aa14.96□□□□□ -0.02
CCDC42-202ENST00000539522 SMCO2A6NFE2 343 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 hCG_1984214I3L0E3 225 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 CDKL5O76039 1030 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 CYP2C19P33261 490 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 ALDH5A1P51649 535 aaPredicted RBP14.95□□□□□ -0.02
CCDC42-202ENST00000539522 OLFML2BQ68BL8 750 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 ZNF467Q7Z7K2 595 aaPredicted RBP14.95□□□□□ -0.02
CCDC42-202ENST00000539522 DPP9Q86TI2 863 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 ZNF713Q8N859 430 aaPredicted RBP14.95□□□□□ -0.02
CCDC42-202ENST00000539522 RASGRP4Q8TDF6 673 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 OXER1Q8TDS5 423 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 PXYLP1Q8TE99 480 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 PGBD1Q96JS3 809 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
CCDC42-202ENST00000539522 RBM27Q9P2N5 1060 aaKnown RBP14.95□□□□□ -0.02
CCDC42-202ENST00000539522 ADCY6O43306 1168 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 HOXD10P28358 340 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 EARS2Q5JPH6 523 aaKnown RBP14.94□□□□□ -0.02
CCDC42-202ENST00000539522 PRAMEF19Q5SWL8 479 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 CPLX2Q6PUV4 134 aaKnown RBP14.94□□□□□ -0.02
CCDC42-202ENST00000539522 MCF2L2Q86YR7 1114 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 TRIM22Q8IYM9 498 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 RAET1EQ8TD07 263 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 CRYGNQ8WXF5 182 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 TNFRSF25Q93038 417 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 ALG1Q9BT22 464 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 MAF1Q9H063 256 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 SH3GLB2Q9NR46 395 aa14.94□□□□□ -0.02
CCDC42-202ENST00000539522 GCOM1H8Y6P7 765 aaPredicted RBP14.93□□□□□ -0.02
CCDC42-202ENST00000539522 RGS20O76081 388 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 PTGS1P23219 599 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 GRK4P32298 578 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms