RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 TTC26A0AVF1 554 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 FAM170AA1A519 330 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 TXNRD1Q16881 649 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 EYA3Q99504 573 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 JADE2Q9NQC1 790 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 TAF1LQ8IZX4 1826 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 C16orf86Q6ZW13 317 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 CEP95Q96GE4 821 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 VAT1LQ9HCJ6 419 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 RAB21Q9UL25 225 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 GPR75-ASB3A0A0A6YYF3 556 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 RCCD1A6NED2 376 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 EDIL3O43854 480 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 UFL1O94874 794 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 PLCG1P19174 1290 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 CCT5P48643 541 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 GNAQP50148 359 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 MSANTD4Q8NCY6 345 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 ZNF507Q8TCN5 953 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 PYM1Q9BRP8 204 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 UBA5Q9GZZ9 404 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 EPN1Q9Y6I3 576 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-208ENST00000539506 RASSF10A6NK89 507 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 UBA7P41226 1012 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 GSTO1P78417 241 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 LETM2Q2VYF4 491 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 TTC31Q49AM3 519 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 ANKRD13CQ8N6S4 541 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 DUSP9Q99956 384 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 TSPYL1Q9H0U9 437 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 AGPAT5Q9NUQ2 364 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 RHOBTB3O94955 611 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 TTI2Q6NXR4 508 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 C15orf52Q6ZUT6 534 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 KRT26Q7Z3Y9 468 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 KIAA1328Q86T90 577 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 HPS3Q969F9 1004 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 PIGSQ96S52 555 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 MMTAG2Q9BU76 263 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
SFSWAP-208ENST00000539506 SMCO2A6NFE2 343 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 USP17L5A8MUK1 530 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 H7C1D1 291 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 PDE2AO00408 941 aaPredicted RBP14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 NAPAP54920 295 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 SLC20A2Q08357 652 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 KCNB1Q14721 858 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 TEX11Q8IYF3 940 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 AFAP1L1Q8TED9 768 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 CCDC51Q96ER9 411 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
SFSWAP-208ENST00000539506 NDUFA10O95299 355 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 FCER1AP12319 257 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 IL1R1P14778 569 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 STK4Q13043 487 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 WDR59Q6PJI9 974 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
SFSWAP-208ENST00000539506 TECP42680 631 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 CRY2Q49AN0 593 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 KCTD16Q68DU8 428 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 CYP26C1Q6V0L0 522 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 TMTC1Q8IUR5 882 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 BIN2Q9UBW5 565 aaPredicted RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 TTF2Q9UNY4 1162 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 PRPHP41219 470 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 RNASE9P60153 205 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 CABP7Q86V35 215 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 HNRNPLLQ8WVV9 542 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 PLEKP08567 350 aaPredicted RBP14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 ATP2B2Q01814 1243 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 SPAG1Q07617 926 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 STIM1Q13586 685 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 MFSD14BQ5SR56 506 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 AMOTL1Q8IY63 956 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 USP21Q9UK80 565 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 JRKLQ9Y4A0 524 aa14.01□□□□□ -0.17
SFSWAP-208ENST00000539506 LY75O60449 1722 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms