RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GLT8D2Q9H1C3 349 aa16.17■□□□□ 0.18
CD4-208ENST00000538827 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
CD4-208ENST00000538827 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
CD4-208ENST00000538827 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
CD4-208ENST00000538827 MANSC4A6NHS7 340 aaPredicted RBP16.16■□□□□ 0.18
CD4-208ENST00000538827 GPR25O00155 361 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 DLL1O00548 723 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 CFBP00751 764 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 CYP2C8P10632 490 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 OAZ1P54368 228 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.18
CD4-208ENST00000538827 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
CD4-208ENST00000538827 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 TEX13BQ9BXU2 312 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.18
CD4-208ENST00000538827 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
CD4-208ENST00000538827 TFIP11Q9UBB9 837 aaKnown RBP16.16■□□□□ 0.18
CD4-208ENST00000538827 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
CD4-208ENST00000538827 PEX10O60683 326 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
CD4-208ENST00000538827 NBR1Q14596 966 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 MUM1L1Q5H9M0 696 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 TRERF1Q96PN7 1200 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
CD4-208ENST00000538827 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
CD4-208ENST00000538827 SPDYE3A6NKU9 549 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 GCOM1H8Y6P7 765 aaPredicted RBP16.14■□□□□ 0.17
CD4-208ENST00000538827 M0R2N6 131 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 NFIBO00712 420 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 OPLAHO14841 1288 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 FKTNO75072 461 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 POLR2MP0CAP2 368 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 STAT3P40763 770 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 TM4SF4P48230 202 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 INF2Q27J81 1249 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 RILPL1Q5EBL4 403 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 TTC38Q5R3I4 469 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 GTF3C2Q8WUA4 911 aaPredicted RBP16.14■□□□□ 0.17
CD4-208ENST00000538827 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 CFAP45Q9UL16 551 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 CLIC4Q9Y696 253 aa16.14■□□□□ 0.17
CD4-208ENST00000538827 PLXNB2O15031 1838 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 CNMDO75829 334 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 MCM4P33991 863 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 CLK2P49760 499 aaKnown RBP16.13■□□□□ 0.17
CD4-208ENST00000538827 SREBF2Q12772 1141 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 STK38Q15208 465 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 CLEC17AQ6ZS10 378 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 NCAPG2Q86XI2 1143 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 CFHR5Q9BXR6 569 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 ACAD9Q9H845 621 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
CD4-208ENST00000538827 LCTP09848 1927 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
CD4-208ENST00000538827 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
CD4-208ENST00000538827 MEIS2O14770 477 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 SF3A1Q15459 793 aaKnown RBP16.12■□□□□ 0.17
CD4-208ENST00000538827 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
CD4-208ENST00000538827 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 SLC30A10Q6XR72 485 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 PTPN18Q99952 460 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 SPATC1LQ9H0A9 340 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 EHMT1Q9H9B1 1298 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 RABGAP1Q9Y3P9 1069 aa16.12■□□□□ 0.17
CD4-208ENST00000538827 TOB1P50616 345 aaPredicted RBP16.11■□□□□ 0.17
CD4-208ENST00000538827 ZNF174Q15697 407 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 LETM2Q2VYF4 491 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 ATL3Q6DD88 541 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 POTEEQ6S8J3 1075 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 RNF207Q6ZRF8 634 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 RIOX2Q8IUF8 465 aa16.11■□□□□ 0.17
CD4-208ENST00000538827 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
CD4-208ENST00000538827 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
CD4-208ENST00000538827 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
CD4-208ENST00000538827 COLQQ9Y215 455 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms