RNA–Protein interactions for RNA: ENST00000538263.5

CYB561A3-211, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-211ENST00000538263 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 ZEB2O60315 1214 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 ZBED4O75132 1171 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 MBD4O95243 580 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 MYL3P08590 195 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 FAM47CQ5HY64 1035 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 FBXO40Q9UH90 709 aa13.2□□□□□ -0.3
CYB561A3-211ENST00000538263 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 GJB5O95377 273 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 RASA1P20936 1047 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 KCNJ6P48051 423 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 AACSQ86V21 672 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 Q9Y3F1 56 aa13.19□□□□□ -0.3
CYB561A3-211ENST00000538263 ZBED9Q6R2W3 1325 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 ASB14A6NK59 587 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 GOLIM4O00461 696 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 GFRA3O60609 400 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 NBNO60934 754 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 SNAP25P60880 206 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 MFSD14AQ96MC6 490 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 RALGAPA2Q2PPJ7 1873 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 DMDP11532 3685 aa13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 ZFHX2Q9C0A1 2572 aaPredicted RBP13.18□□□□□ -0.3
CYB561A3-211ENST00000538263 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 LTBRP36941 435 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 COPS5Q92905 334 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 RAD9AQ99638 391 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 CACNA1HO95180 2353 aa13.17□□□□□ -0.3
CYB561A3-211ENST00000538263 ADD2P35612 726 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 OAZ1P54368 228 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 PTPN5P54829 565 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 CLUL1Q15846 466 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 MRPL38Q96DV4 380 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
CYB561A3-211ENST00000538263 RGS20O76081 388 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 ALAS1P13196 640 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■■■□ 21.1
CYB561A3-211ENST00000538263 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
CYB561A3-211ENST00000538263 CXCL10P02778 98 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 BFSP2Q13515 415 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 MBTPS1Q14703 1052 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 CNKSR3Q6P9H4 555 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 FTSJ3Q8IY81 847 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 WNT8BQ93098 351 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 PTPRZ1P23471 2315 aaPredicted RBP13.14□□□□□ -0.31
CYB561A3-211ENST00000538263 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
CYB561A3-211ENST00000538263 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-211ENST00000538263 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms