RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 NPR1P16066 1061 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 UBE2SQ16763 222 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 GOLGA6AQ9NYA3 693 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 CCDC14Q49A88 953 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
CIT-208ENST00000537607 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■□□□□ 8.6
CIT-208ENST00000537607 MEIS1O00470 390 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 IKBKBO14920 756 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 GCFC2P16383 781 aaKnown RBP13.5□□□□□ -0.25
CIT-208ENST00000537607 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
CIT-208ENST00000537607 EXOC3L4Q17RC7 722 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 H2AFVQ71UI9 128 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 CACTINQ8WUQ7 758 aaKnown RBP13.5□□□□□ -0.25
CIT-208ENST00000537607 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
CIT-208ENST00000537607 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
CIT-208ENST00000537607 COL15A1P39059 1388 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 SNX16P57768 344 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 DMP1Q13316 513 aaPredicted RBP13.49□□□□□ -0.25
CIT-208ENST00000537607 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 C1orf112Q9NSG2 853 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 NDC80O14777 642 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 CCDC93Q567U6 631 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 IPO4Q8TEX9 1081 aaKnown RBP13.49□□□□□ -0.25
CIT-208ENST00000537607 P2RX5Q93086 422 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
CIT-208ENST00000537607 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
CIT-208ENST00000537607 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 NEDD4P46934 1319 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 M0QZ92 97 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 STAT2P52630 851 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 SLC44A5Q8NCS7 719 aa13.49□□□□□ -0.25
CIT-208ENST00000537607 CDHR2Q9BYE9 1310 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 IFNB1P01574 187 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 SCARF1Q14162 830 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 DHTKD1Q96HY7 919 aaPredicted RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 HYOU1Q9Y4L1 999 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 C21orf2O43822 256 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 YARSP54577 528 aaKnown RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 IGBP1P78318 339 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 FKBP3Q00688 224 aaKnown RBP13.48□□□□□ -0.25
CIT-208ENST00000537607 WHAMMP3Q1A5X7 153 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 GAS8O95995 478 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 PLCG1P19174 1290 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
CIT-208ENST00000537607 EEF1GP26641 437 aaKnown RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 CDC37Q16543 378 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 TRIM7Q9C029 511 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 ATP5DP30049 168 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 FOXO4P98177 505 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 KRT71Q3SY84 523 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 CEP63Q96MT8 703 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 ABCA6Q8N139 1617 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 VPS41P49754 854 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 KCTD2Q14681 263 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 SETDB1Q15047 1291 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 FOXP4Q8IVH2 680 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 RPAP1Q9BWH6 1393 aaPredicted RBP13.47□□□□□ -0.25
CIT-208ENST00000537607 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 H0YCG3 227 aa13.47□□□□□ -0.25
CIT-208ENST00000537607 NMT2O60551 498 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms