RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 L1CAMP32004 1257 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 TCEAL1Q15170 157 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 VWA3BQ502W6 1294 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 KIAA1211LQ6NV74 962 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 TMEM151BQ8IW70 566 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 C19orf47Q8N9M1 422 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 PHAXQ9H814 394 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 DIS3Q9Y2L1 958 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-203ENST00000537585 FOXD2O60548 495 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 NOP2P46087 812 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 CYP4F3Q08477 520 aa7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 ARHGEF39Q8N4T4 335 aa7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 RELTQ969Z4 430 aa7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 SIT1Q9Y3P8 196 aa7.03□□□□□ -1.28
SRGAP1-203ENST00000537585 TBX1O43435 398 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 ASGR2P07307 311 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 DLX2Q07687 328 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 NR1I3Q14994 352 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 MTA3Q9BTC8 594 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 GBP3Q9H0R5 595 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 RTEL1Q9NZ71 1219 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 BACE2Q9Y5Z0 518 aa7.02□□□□□ -1.29
SRGAP1-203ENST00000537585 A0A1W2PQJ5 194 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 C2orf71A6NGG8 1288 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 TBC1D8O95759 1140 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 PMLP29590 882 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 TMEM62Q0P6H9 643 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 NFIXQ14938 502 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 LINC01356Q8N9X3 169 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 GPRC5CQ9NQ84 441 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 CLEC1BQ9P126 229 aa7.01□□□□□ -1.29
SRGAP1-203ENST00000537585 B2RBV5 119 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 KCNH1O95259 989 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 CORO7P57737 925 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 FOXO4P98177 505 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 AMPD2Q01433 879 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 SKOR2Q2VWA4 1001 aaPredicted RBP7□□□□□ -1.29
SRGAP1-203ENST00000537585 FNIP1Q8TF40 1166 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 ZNF526Q8TF50 670 aaPredicted RBP7□□□□□ -1.29
SRGAP1-203ENST00000537585 NOX5Q96PH1 765 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 SUGT1Q9Y2Z0 365 aa7□□□□□ -1.29
SRGAP1-203ENST00000537585 C7orf72A4D263 438 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 PPM1BO75688 479 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 SEPHS1P49903 392 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 CASP7P55210 303 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 HTRA3P83110 453 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 NLGN2Q8NFZ4 835 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 OR6P1Q8NGX9 317 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 CPLX3Q8WVH0 158 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 DPF3Q92784 378 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 MRVI1Q9Y6F6 885 aa6.99□□□□□ -1.29
SRGAP1-203ENST00000537585 ARNTLO00327 626 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 PRICKLE3O43900 615 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 SASH1O94885 1247 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 PLS3P13797 630 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 SLURP1P55000 103 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 SCRN1Q12765 414 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 INF2Q27J81 1249 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 LZTR1Q8N653 840 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 ALG3Q92685 438 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 RCC1LQ96I51 464 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 DBR1Q9UK59 544 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 AKT3Q9Y243 479 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
SRGAP1-203ENST00000537585 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 PFKLP17858 780 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 GRB10Q13322 594 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 RGS22Q8NE09 1264 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 TGIF2Q9GZN2 237 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 LUC7LQ9NQ29 371 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
SRGAP1-203ENST00000537585 ANKRD34BA5PLL1 514 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 SMAD7O15105 426 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 FUCA1P04066 466 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 NTRK1P04629 796 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 THBDP07204 575 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 SMARCC2Q8TAQ2 1214 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 COPS5Q92905 334 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 TMEFF2Q9UIK5 374 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 FBXL7Q9UJT9 491 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 PMF1-BGLAPU3KQ54 211 aa6.96□□□□□ -1.3
SRGAP1-203ENST00000537585 PAMP19021 973 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 WWC2Q6AWC2 1192 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 C6orf15Q6UXA7 325 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 LIPIQ6XZB0 460 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 CCDC103Q8IW40 242 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms