RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 NT5C3AQ9H0P0 336 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 EXOC1Q9NV70 894 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
SMG6-203ENST00000536871 TECP42680 631 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 KMT5BQ4FZB7 885 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 E4F1Q66K89 784 aaPredicted RBP15.24■□□□□ 0.03
SMG6-203ENST00000536871 FOXR2Q6PJQ5 311 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 BTNL9Q6UXG8 535 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 SH3BP5LQ7L8J4 393 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 APTXQ7Z2E3 356 aaKnown RBP15.24■□□□□ 0.03
SMG6-203ENST00000536871 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 TRIM9Q9C026 710 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
SMG6-203ENST00000536871 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
SMG6-203ENST00000536871 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 USP17L10C9JJH3 530 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TMEM232C9JQI7 657 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 F5H6K3 240 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 C21orf2O43822 256 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CASP1P29466 404 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TXKP42681 527 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 PRCPP42785 496 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TNNI2P48788 182 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 KLRC3Q07444 240 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 DLGAP5Q15398 846 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 QRICH1Q2TAL8 776 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TTBK2Q6IQ55 1244 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 STAMQ92783 540 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TDRD3Q9H7E2 651 aaKnown RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 MAGEC2Q9UBF1 373 aaPredicted RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 DDX25Q9UHL0 483 aaKnown RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 PCDHA1Q9Y5I3 950 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 ZNF646O15015 1829 aaPredicted RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TBX3O15119 743 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CTIFO43310 598 aaKnown RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 KLRC4O43908 158 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 MARCH6O60337 910 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 TBC1D12O60347 775 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CYP3A7P24462 503 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CDC25AP30304 524 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 PBX1P40424 430 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 STX17P56962 302 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 PSMD2Q13200 908 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CDC37Q16543 378 aaPredicted RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 TCP11X2Q5H9J9 407 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 CLEC10AQ8IUN9 316 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 SLFN12Q8IYM2 578 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 IQCDQ96DY2 449 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
SMG6-203ENST00000536871 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
SMG6-203ENST00000536871 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
SMG6-203ENST00000536871 PP2D1A8MPX8 630 aa15.22■□□□□ 0.03
SMG6-203ENST00000536871 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
SMG6-203ENST00000536871 N4BP3O15049 544 aa15.22■□□□□ 0.03
SMG6-203ENST00000536871 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
SMG6-203ENST00000536871 FGFR1OPO95684 399 aaKnown RBP15.22■□□□□ 0.03
SMG6-203ENST00000536871 BMP3P12645 472 aa15.22■□□□□ 0.03
SMG6-203ENST00000536871 LARGE2Q8N3Y3 721 aa15.22■□□□□ 0.03
SMG6-203ENST00000536871 KCNJ18B7U540 433 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 CCNE1P24864 410 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 CACNB3P54284 484 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 ASIC1P78348 528 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 DMTNQ08495 405 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 KCNJ12Q14500 433 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 HYIQ5T013 277 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 SYDE2Q5VT97 1194 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 FBXO11Q86XK2 927 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 SMYD4Q8IYR2 804 aaPredicted RBP15.21■□□□□ 0.03
SMG6-203ENST00000536871 TC2NQ8N9U0 490 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
SMG6-203ENST00000536871 PRMT6Q96LA8 375 aaPredicted RBP15.21■□□□□ 0.03
SMG6-203ENST00000536871 MBOAT7Q96N66 472 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 GMLQ99445 158 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
SMG6-203ENST00000536871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMG6-203ENST00000536871 GOPCQ9HD26 462 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
SMG6-203ENST00000536871 SIPA1L1O43166 1804 aa15.21■□□□□ 0.02
SMG6-203ENST00000536871 PSME4Q14997 1843 aa15.21■□□□□ 0.02
SMG6-203ENST00000536871 PHLPP2Q6ZVD8 1323 aa15.21■□□□□ 0.02
SMG6-203ENST00000536871 SCN9AQ15858 1988 aa15.21■□□□□ 0.02
SMG6-203ENST00000536871 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 PLA2G6O60733 806 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 KIF20AO95235 890 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 SLC16A2P36021 539 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 COPB1P53618 953 aaKnown RBP15.2■□□□□ 0.02
SMG6-203ENST00000536871 PDE4DQ08499 809 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 KRT31Q15323 416 aa15.2■□□□□ 0.02
SMG6-203ENST00000536871 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms