RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 METTL16Q86W50 562 aaKnown RBP24.03■■□□□ 1.44
TRIM3-214ENST00000536344 FOXP4Q8IVH2 680 aaPredicted RBP24.03■■□□□ 1.44
TRIM3-214ENST00000536344 STAMQ92783 540 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 VEZTQ9HBM0 779 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 SERPINA10Q9UK55 444 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 L1RE1Q9UN81 338 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 A0A087X0B3 334 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 TTLL1O95922 423 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 SEPT2Q15019 361 aa24.03■■□□□ 1.44
TRIM3-214ENST00000536344 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.03■■□□□ 1.44
TRIM3-214ENST00000536344 CERKLQ49MI3 558 aaPredicted RBP24.02■■□□□ 1.44
TRIM3-214ENST00000536344 HDXQ7Z353 690 aa24.02■■□□□ 1.44
TRIM3-214ENST00000536344 SUPT20HQ8NEM7 779 aa24.02■■□□□ 1.44
TRIM3-214ENST00000536344 PCDHA4Q9UN74 947 aa24.02■■□□□ 1.44
TRIM3-214ENST00000536344 TC2NQ8N9U0 490 aa24.02■■□□□ 1.44
TRIM3-214ENST00000536344 BARHL2Q9NY43 387 aa24.02■■□□□ 1.44
TRIM3-214ENST00000536344 SRPRBQ9Y5M8 271 aaKnown RBP24.02■■□□□ 1.44
TRIM3-214ENST00000536344 IKBKBO14920 756 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 SNAP25P60880 206 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 VSNL1P62760 191 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 JAKMIP3Q5VZ66 844 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 PCDHA6Q9UN73 950 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 PCDHA8Q9Y5H6 950 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
TRIM3-214ENST00000536344 RTKN2Q8IZC4 609 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 RRP36Q96EU6 259 aaKnown RBP24.01■■□□□ 1.43
TRIM3-214ENST00000536344 CSRNP1Q96S65 589 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 NUP88Q99567 741 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-214ENST00000536344 PI4KBQ9UBF8 816 aa24.01■■□□□ 1.43
TRIM3-214ENST00000536344 BIN2Q9UBW5 565 aaPredicted RBP24.01■■□□□ 1.43
TRIM3-214ENST00000536344 SEC63Q9UGP8 760 aaKnown RBP24.01■■□□□ 1.43
TRIM3-214ENST00000536344 IGKV6D-41A0A0C4DH26 115 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 CCDC194A0A1B0GVG4 234 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 EEF2P13639 858 aaKnown RBP24■■□□□ 1.43
TRIM3-214ENST00000536344 MYL5Q02045 173 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 RSBN1LQ6PCB5 846 aaPredicted RBP24■■□□□ 1.43
TRIM3-214ENST00000536344 SYMPKQ92797 1274 aaKnown RBP24■■□□□ 1.43
TRIM3-214ENST00000536344 TMEM260Q9NX78 707 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 SWAP70Q9UH65 585 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 CEP131Q9UPN4 1083 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 SMCO2A6NFE2 343 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 RBM26Q5T8P6 1007 aaKnown RBP24■■□□□ 1.43
TRIM3-214ENST00000536344 SRGAP1Q7Z6B7 1085 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 PPM1EQ8WY54 764 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 FAM204AQ9H8W3 233 aa24■■□□□ 1.43
TRIM3-214ENST00000536344 LRRIQ3A6PVS8 624 aaPredicted RBP23.99■■□□□ 1.43
TRIM3-214ENST00000536344 RPS6KA5O75582 802 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 AFMP43652 599 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 IL17AQ16552 155 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 DEF6Q9H4E7 631 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 PIM2Q9P1W9 311 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 TAL1P17542 331 aaPredicted RBP23.99■■□□□ 1.43
TRIM3-214ENST00000536344 CASP8Q14790 479 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 FCHSD1Q86WN1 690 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 UIMC1Q96RL1 719 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 IDI2Q9BXS1 227 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 PCDHA5Q9Y5H7 936 aa23.99■■□□□ 1.43
TRIM3-214ENST00000536344 SOWAHDA6NJG2 315 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 CT47A1Q5JQC4 288 aaPredicted RBP23.98■■□□□ 1.43
TRIM3-214ENST00000536344 MIGA2Q7L4E1 593 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 SPZ1Q9BXG8 430 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 BCS1LQ9Y276 419 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 CALML3P27482 149 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 MMP14P50281 582 aa23.98■■□□□ 1.43
TRIM3-214ENST00000536344 USP17L10C9JJH3 530 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 SPICE1Q8N0Z3 855 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 MICALL1Q8N3F8 863 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 ZNF646O15015 1829 aaPredicted RBP23.97■■□□□ 1.43
TRIM3-214ENST00000536344 CBFA2T2O43439 604 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 ABL1P00519 1130 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 DLGAP5Q15398 846 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 ADGRF4Q8IZF3 695 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 OGFOD1Q8N543 542 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 PLIN2Q99541 437 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 TMEM60Q9H2L4 133 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 SIPA1L1O43166 1804 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 SPDYE2BA6NHP3 402 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 PP2D1A8MPX8 630 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 GH2P01242 217 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 MYCNP04198 464 aaPredicted RBP23.97■■□□□ 1.43
TRIM3-214ENST00000536344 SPDYE6P0CI01 402 aa23.97■■□□□ 1.43
TRIM3-214ENST00000536344 DHX8Q14562 1220 aaKnown RBP23.97■■□□□ 1.43
TRIM3-214ENST00000536344 SAMD1Q6SPF0 538 aaPredicted RBP23.97■■□□□ 1.43
TRIM3-214ENST00000536344 HNRNPLLQ8WVV9 542 aaKnown RBP23.97■■□□□ 1.43
TRIM3-214ENST00000536344 MYH4Q9Y623 1939 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 HDLBPQ00341 1268 aaKnown RBP23.96■■□□□ 1.43
TRIM3-214ENST00000536344 CXCL9Q07325 125 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 TBX2Q13207 712 aaPredicted RBP23.96■■□□□ 1.43
TRIM3-214ENST00000536344 LETM2Q2VYF4 491 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 NIM1KQ8IY84 436 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 KAT2BQ92831 832 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 TMEM39BQ9GZU3 492 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 DHX36Q9H2U1 1008 aaKnown RBP23.96■■□□□ 1.43
TRIM3-214ENST00000536344 BMP6P22004 513 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 NOVP48745 357 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 FKBP1AP62942 108 aaKnown RBP23.96■■□□□ 1.43
TRIM3-214ENST00000536344 SIAH1Q8IUQ4 282 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 PSMD1Q99460 953 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms