RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PALLDQ8WX93 1383 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 PIK3C2AO00443 1686 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 KAT6BQ8WYB5 2073 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 PPLO60437 1756 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 COL18A1P39060 1754 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 NSD2O96028 1365 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 A0A0C4DFX4 3053 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 GADD45BO75293 160 aaPredicted RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 ESR1P03372 595 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 NME2P22392 152 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 TRHRP34981 398 aaPredicted RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 ORC1Q13415 861 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 SPATS1Q496A3 300 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 DTHD1Q6ZMT9 781 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 LILRA2Q8N149 483 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 ZCRB1Q8TBF4 217 aaKnown RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 CCDC74AQ96AQ1 378 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 PBXIP1Q96AQ6 731 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 ADAMTS10Q9H324 1103 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 TAF1DQ9H5J8 278 aaPredicted RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 ZNF552Q9H707 407 aaPredicted RBP5.73□□□□□ -1.49
YBX3-205ENST00000536107 PKD1L3Q7Z443 1732 aa5.73□□□□□ -1.49
YBX3-205ENST00000536107 DCDC2CA8MYV0 355 aa5.72□□□□□ -1.49
YBX3-205ENST00000536107 EFEMP1Q12805 493 aa5.72□□□□□ -1.49
YBX3-205ENST00000536107 GRM2Q14416 872 aa5.72□□□□□ -1.49
YBX3-205ENST00000536107 C12orf40Q86WS4 652 aa5.72□□□□□ -1.49
YBX3-205ENST00000536107 LTV1Q96GA3 475 aaPredicted RBP5.72□□□□□ -1.49
YBX3-205ENST00000536107 IGHA2P01877 340 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 RFC4P35249 363 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 SSPNQ14714 243 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 ZNF746Q6NUN9 644 aaPredicted RBP5.71□□□□□ -1.5
YBX3-205ENST00000536107 LINC00116Q8NCU8 138 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 PDZD8Q8NEN9 1154 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 ZNF507Q8TCN5 953 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 COX4I2Q96KJ9 171 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
YBX3-205ENST00000536107 MTMR7Q9Y216 660 aa5.71□□□□□ -1.5
YBX3-205ENST00000536107 N4BP2Q86UW6 1770 aaPredicted RBP5.7□□□□□ -1.5
YBX3-205ENST00000536107 WNK3Q9BYP7 1800 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 XRCC5P13010 732 aaKnown RBP5.7□□□□□ -1.5
YBX3-205ENST00000536107 KIR3DL1P43629 444 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 TTLL6Q8N841 843 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 MFSD2AQ8NA29 543 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 INTS4Q96HW7 963 aaKnown RBP5.7□□□□□ -1.5
YBX3-205ENST00000536107 MIPEPQ99797 713 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 SGPP1Q9BX95 441 aa5.7□□□□□ -1.5
YBX3-205ENST00000536107 DDX21Q9NR30 783 aaKnown RBP eCLIP5.7□□□□□ -1.5
YBX3-205ENST00000536107 ITSN1Q15811 1721 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 CUL9Q8IWT3 2517 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 KDM6AO15550 1401 aaPredicted RBP5.69□□□□□ -1.5
YBX3-205ENST00000536107 SUV39H1O43463 412 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 CBX7O95931 251 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 EPHX2P34913 555 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 CAP2P40123 477 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 FCGRTP55899 365 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 TNK2Q07912 1038 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 NR0B2Q15466 257 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 CTU1Q7Z7A3 348 aaKnown RBP5.69□□□□□ -1.5
YBX3-205ENST00000536107 PNMA8AQ86V59 439 aaPredicted RBP5.69□□□□□ -1.5
YBX3-205ENST00000536107 FEZF2Q8TBJ5 459 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 DACT3Q96B18 629 aaPredicted RBP5.69□□□□□ -1.5
YBX3-205ENST00000536107 TEPSINQ96N21 525 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 HACL1Q9UJ83 578 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 BRPF3Q9ULD4 1205 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 MYRFQ9Y2G1 1151 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 YBX2Q9Y2T7 364 aaKnown RBP5.69□□□□□ -1.5
YBX3-205ENST00000536107 SLIT3O75094 1523 aa5.69□□□□□ -1.5
YBX3-205ENST00000536107 GYS1P13807 737 aa5.68□□□□□ -1.5
YBX3-205ENST00000536107 SLBPQ14493 270 aaKnown RBP eCLIP5.68□□□□□ -1.5
YBX3-205ENST00000536107 OXR1Q8N573 874 aa5.68□□□□□ -1.5
YBX3-205ENST00000536107 PIWIL2Q8TC59 973 aaKnown RBP5.68□□□□□ -1.5
YBX3-205ENST00000536107 SIGLEC10Q96LC7 697 aa5.68□□□□□ -1.5
YBX3-205ENST00000536107 CBX8Q9HC52 389 aa5.68□□□□□ -1.5
YBX3-205ENST00000536107 PPP4R2Q9NY27 417 aa5.68□□□□□ -1.5
YBX3-205ENST00000536107 FITM1A5D6W6 292 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 SLC22A31A6NKX4 558 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 EIF1AYO14602 144 aaKnown RBP5.67□□□□□ -1.5
YBX3-205ENST00000536107 INSRRP14616 1297 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 PI3P19957 117 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 CYP7A1P22680 504 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 AFF3P51826 1226 aaKnown RBP5.67□□□□□ -1.5
YBX3-205ENST00000536107 FMR1Q06787 632 aaKnown RBP eCLIP5.67□□□□□ -1.5
YBX3-205ENST00000536107 TIGD5Q53EQ6 642 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 LETMD1Q6P1Q0 360 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 C2CD5Q86YS7 1000 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 CREG2Q8IUH2 290 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 RIN3Q8TB24 985 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 FAM129BQ96TA1 746 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 HDAC9Q9UKV0 1011 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 TTC21BQ7Z4L5 1316 aa5.67□□□□□ -1.5
YBX3-205ENST00000536107 VIRMAQ69YN4 1812 aaKnown RBP5.67□□□□□ -1.5
YBX3-205ENST00000536107 USP54Q70EL1 1684 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 LY75O60449 1722 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 C4BP0C0L5 1744 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 ZC3H12DA2A288 527 aaKnown RBP5.66□□□□□ -1.5
YBX3-205ENST00000536107 H0YIN7 160 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 TRAF5O00463 557 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 ZGLP1P0C6A0 271 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms