RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 UFL1O94874 794 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 OAS2P29728 719 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 CYLC1P35663 651 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 HDXQ7Z353 690 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 MTMR9Q96QG7 549 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 PNKPQ96T60 521 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 AGPAT5Q9NUQ2 364 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
CHMP1A-202ENST00000535997 KRT86O43790 486 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CDK17Q00537 523 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CCDC122Q5T0U0 273 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 SV2BQ7L1I2 683 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 TRAPPC11Q7Z392 1133 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CNOT6LQ96LI5 555 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 L1RE1Q9UN81 338 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CDK5RAP2Q96SN8 1893 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 A0A1W2PQJ5 194 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 RASSF10A6NK89 507 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 PDIA5Q14554 519 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 MFSD14BQ5SR56 506 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 CENPPQ6IPU0 288 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 PRR5LQ6MZQ0 368 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 BIN2Q9UBW5 565 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-202ENST00000535997 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 EIF3CLB5ME19 914 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 BBOX1O75936 387 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 IPO7O95373 1038 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 FCER1AP12319 257 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 HOXA7P31268 230 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 HERVK_113P62684 666 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 GPS2Q13227 327 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 EIF3CQ99613 913 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 STK17AQ9UEE5 414 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 GAKO14976 1311 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
CHMP1A-202ENST00000535997 TXKP42681 527 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 MIIPQ5JXC2 388 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 PAPD7Q5XG87 772 aaKnown RBP17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 FAM196AQ6ZSG2 479 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 UBA5Q9GZZ9 404 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 NHEJ1Q9H9Q4 299 aaPredicted RBP17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 TRIM10Q9UDY6 481 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 LRWD1Q9UFC0 647 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 SAR1BQ9Y6B6 198 aa17.89■□□□□ 0.46
CHMP1A-202ENST00000535997 TFRCP02786 760 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 PDHBP11177 359 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 ADRA2BP18089 450 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 CALCRLQ16602 461 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 FKBP15Q5T1M5 1219 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 KIAA1328Q86T90 577 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 EEF2KMTQ96G04 330 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 RBM17Q96I25 401 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 RAB34Q9BZG1 259 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 ABCB6Q9NP58 842 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
CHMP1A-202ENST00000535997 RHOXF2BP0C7M4 288 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 TMEM266Q2M3C6 531 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 ASPRV1Q53RT3 343 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 WDR93Q6P2C0 686 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 KIAA0895Q8NCT3 520 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 RHOXF2Q9BQY4 288 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 SEMA6BQ9H3T3 888 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 MTMR4Q9NYA4 1195 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 DDX60LQ5H9U9 1706 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 TAF1LQ8IZX4 1826 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 TOM1O60784 492 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 GRB10Q13322 594 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 UNC13DQ70J99 1090 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 RPGRIP1Q96KN7 1286 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 PCMTD1Q96MG8 357 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 BLOC1S4Q9NUP1 217 aa17.88■□□□□ 0.45
CHMP1A-202ENST00000535997 FGFR1OPO95684 399 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 HNRNPH3P31942 346 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 NCAPH2Q6IBW4 605 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 NOA1Q8NC60 698 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 LRRC27Q9C0I9 530 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 EIF3JO75822 258 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 SNHG28P0DPA3 235 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 ADCY7P51828 1080 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 VSNL1P62760 191 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 MCM6Q14566 821 aa17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 CCDC84Q86UT8 332 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 GUF1Q8N442 669 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 LARP4BQ92615 738 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-202ENST00000535997 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms