RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RANBP1P43487 201 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 NOVP48745 357 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 RASSF7Q02833 373 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 STX1AQ16623 288 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CPLX3Q8WVH0 158 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 MIEF2Q96C03 454 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 SPDL1Q96EA4 605 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 GMLQ99445 158 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 M0R2N6 131 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ZSCAN12O43309 604 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 PPIP5K2O43314 1243 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 CHMP4BP1P59074 171 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 SNAP25P60880 206 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 NYAP1Q6ZVC0 841 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 GRAMD1CQ8IYS0 662 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 YIPF3Q9GZM5 350 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 MKNK2Q9HBH9 465 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 CABP5Q9NP86 173 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 PPP1R1BQ9UD71 204 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-216ENST00000534765 MYO6Q9UM54 1294 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 STK36Q9NRP7 1315 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 IPO7O95373 1038 aaKnown RBP10.1□□□□□ -0.79
SF3B2-216ENST00000534765 TSPY3P0CV98 308 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 TSPY8P0CW00 308 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 SNX1Q13596 522 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ANO1Q5XXA6 986 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 RBM43Q6ZSC3 357 aaKnown RBP10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ATRIPQ8WXE1 791 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 RNF40O75150 1001 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 GDF11O95390 407 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 BAG3O95817 575 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 BAG6P46379 1132 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 CCDC150Q8NCX0 1101 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ARMC2Q8NEN0 867 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 CAGE1Q8TC20 777 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ZDHHC15Q96MV8 337 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 PSMD1Q99460 953 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 P2RX7Q99572 595 aaKnown RBP10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
SF3B2-216ENST00000534765 ARFGEF1Q9Y6D6 1849 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 TADA3O75528 432 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 STRIP1Q5VSL9 837 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 NOSTRINQ8IVI9 506 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 DESI2Q9BSY9 194 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 XPO4Q9C0E2 1151 aaKnown RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 PICK1Q9NRD5 415 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 GOLGA6L7A0A1B0GV03 622 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 PALM3A6NDB9 673 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 ZRANB2O95218 330 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 TOP1P11387 765 aaKnown RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 SLC16A2P36021 539 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 IRX1P78414 480 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 NBPF9Q3BBW0 867 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 PODNQ7Z5L7 613 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 RIN2Q8WYP3 895 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 KAT2BQ92831 832 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 SCAND2PQ9GZW5 306 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 BMP6P22004 513 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 CDC25AP30304 524 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-216ENST00000534765 TTLL6Q8N841 843 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 FAM76AQ8TAV0 307 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 GBP3Q9H0R5 595 aa10.09□□□□□ -0.79
SF3B2-216ENST00000534765 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC189A1A4V9 331 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 PRPF3O43395 683 aaKnown RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 GSTO1P78417 241 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CCZ1BP86790 482 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CCZ1P86791 482 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 PDE4BQ07343 736 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CEP112Q8N8E3 955 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 TBC1D22AQ8WUA7 517 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 ANKS1AQ92625 1134 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 GJA10Q969M2 543 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 NUP88Q99567 741 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CLSTN2Q9H4D0 955 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 PFKFB1P16118 471 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 GNGT1P63211 74 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 CATIPQ7Z7H3 387 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 KIAA1328Q86T90 577 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 DHX58Q96C10 678 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 RSRC1Q96IZ7 334 aaKnown RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 GLIS2Q9BZE0 524 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 MTMR4Q9NYA4 1195 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 MKI67P46013 3256 aaKnown RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 ERICH2A1L162 156 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 SPTLC2O15270 562 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 DEXIO95424 95 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 SLC39A14Q15043 492 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms