RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
USF1-211ENST00000534633 SCN10AQ9Y5Y9 1956 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 GRIN2DO15399 1336 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 A0A0D9SFI3 127 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 ACRP10323 421 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 SLC16A2P36021 539 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 ALDH5A1P51649 535 aaPredicted RBP14.76□□□□□ -0.05
USF1-211ENST00000534633 TTBK2Q6IQ55 1244 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 HERVK_113Q902F9 699 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 RILPL2Q969X0 211 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 FAM227BQ96M60 508 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 PBX4Q9BYU1 374 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 MTIF3Q9H2K0 278 aaKnown RBP14.76□□□□□ -0.05
USF1-211ENST00000534633 HIPK3Q9H422 1215 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 PNMA2Q9UL42 364 aa14.76□□□□□ -0.05
USF1-211ENST00000534633 TRIM6-TRIM34B2RNG4 842 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 HSPD1P10809 573 aaKnown RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 SDSP20132 328 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 PTGS1P23219 599 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 BAATQ14032 418 aaPredicted RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 RAB30Q15771 203 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 DUSP28Q4G0W2 176 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 RRP12Q5JTH9 1297 aaKnown RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 TTC14Q96N46 770 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 SPTBN5Q9NRC6 3674 aaKnown RBP14.75□□□□□ -0.05
USF1-211ENST00000534633 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
USF1-211ENST00000534633 KIAA1217Q5T5P2 1943 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 TANC1Q9C0D5 1861 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 FRMPD2Q68DX3 1309 aaPredicted RBP14.74□□□□□ -0.05
USF1-211ENST00000534633 GRXCR1A8MXD5 290 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 NFIBO00712 420 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 B4GALT4O60513 344 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 FGBP02675 491 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 PDHBP11177 359 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 PBX2P40425 430 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 TMEM63BQ5T3F8 832 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 NOC4LQ9BVI4 516 aaKnown RBP14.74□□□□□ -0.05
USF1-211ENST00000534633 GPCPD1Q9NPB8 672 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 POLR3EQ9NVU0 708 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 CHD9Q3L8U1 2897 aa14.74□□□□□ -0.05
USF1-211ENST00000534633 UMODL1Q5DID0 1318 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 CCDC171Q6TFL3 1326 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 WDR19Q8NEZ3 1342 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 RBM47A0AV96 593 aaKnown RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 PTPDC1A2A3K4 754 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 CPT1AP50416 773 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 PSMC6P62333 389 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 NMIQ13287 307 aaPredicted RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 ZNF589Q86UQ0 364 aaPredicted RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 CLEC4DQ8WXI8 215 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 SYMPKQ92797 1274 aaKnown RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 GAS2L1Q99501 681 aaPredicted RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 MPHOSPH6Q99547 160 aaKnown RBP14.73□□□□□ -0.05
USF1-211ENST00000534633 WDR11Q9BZH6 1224 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 TRPV6Q9H1D0 765 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 MSRAQ9UJ68 235 aa14.73□□□□□ -0.05
USF1-211ENST00000534633 SNHG28P0DPA3 235 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 MFAP1P55081 439 aaKnown RBP14.72□□□□□ -0.05
USF1-211ENST00000534633 CCL23P55773 120 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 HAND2P61296 217 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 SLC30A10Q6XR72 485 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
USF1-211ENST00000534633 USP38Q8NB14 1042 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 DNERQ8NFT8 737 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 WNT8AQ9H1J5 351 aa14.72□□□□□ -0.05
USF1-211ENST00000534633 ALDH8A1Q9H2A2 487 aaPredicted RBP14.72□□□□□ -0.05
USF1-211ENST00000534633 RNF41Q9H4P4 317 aaPredicted RBP14.72□□□□□ -0.05
USF1-211ENST00000534633 CXXC1Q9P0U4 656 aaPredicted RBP14.72□□□□□ -0.05
USF1-211ENST00000534633 TRIP12Q14669 1992 aaPredicted RBP14.71□□□□□ -0.05
USF1-211ENST00000534633 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
USF1-211ENST00000534633 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 CALML3P27482 149 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 NT5C2P49902 561 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 PURAQ00577 322 aaKnown RBP14.71□□□□□ -0.05
USF1-211ENST00000534633 PDE4DQ08499 809 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 GPATCH4Q5T3I0 446 aaKnown RBP14.71□□□□□ -0.05
USF1-211ENST00000534633 OTOP2Q7RTS6 562 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 TBC1D10CQ8IV04 446 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 IL25Q9H293 177 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 PRDM12Q9H4Q4 367 aa14.71□□□□□ -0.05
USF1-211ENST00000534633 RAD50Q92878 1312 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 TTC28Q96AY4 2481 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 B4DLN1 442 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 PFKMP08237 780 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 MYL3P08590 195 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 EDNRBP24530 442 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 MRPL12P52815 198 aaKnown RBP14.7□□□□□ -0.06
USF1-211ENST00000534633 RPS6P62753 249 aaKnown RBP14.7□□□□□ -0.06
USF1-211ENST00000534633 PPP2R5BQ15173 497 aa14.7□□□□□ -0.06
USF1-211ENST00000534633 BRDTQ58F21 947 aaPredicted RBP14.7□□□□□ -0.06
USF1-211ENST00000534633 TJAP1Q5JTD0 557 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms