RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 PURAQ00577 322 aaKnown RBP9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 GSE1Q14687 1217 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 SLC9C2Q5TAH2 1124 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 CHD1LQ86WJ1 897 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 TGS1Q96RS0 853 aaKnown RBP9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 LMCD1Q9NZU5 365 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 COL11A1P12107 1806 aaPredicted RBP9.98□□□□□ -0.81
SHARPIN-210ENST00000534435 TCRBV5S4A2TA0A5A2 114 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 USP17L12C9JPN9 530 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 USP17L21D6R901 530 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 F5H6K3 240 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 ZBED4O75132 1171 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 SURF6O75683 361 aaKnown RBP9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 GNAI2P04899 355 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 KCNJ6P48051 423 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 PTPN5P54829 565 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 VCPP55072 806 aaKnown RBP9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 KLRC3Q07444 240 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 DLX2Q07687 328 aaPredicted RBP9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 POLA2Q14181 598 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 RNF135Q8IUD6 432 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 ADHFE1Q8IWW8 467 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 SLC38A10Q9HBR0 1119 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 HDAC5Q9UQL6 1122 aa9.97□□□□□ -0.81
SHARPIN-210ENST00000534435 PARP14Q460N5 1801 aa9.96□□□□□ -0.81
SHARPIN-210ENST00000534435 SCN5AQ14524 2016 aa9.96□□□□□ -0.81
SHARPIN-210ENST00000534435 ATP2A1O14983 1001 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 ZEB2O60315 1214 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 NBNO60934 754 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 MBD4O95243 580 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 GJB5O95377 273 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 SUPT20HL2P0C7V6 817 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 RFC2P35250 354 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 LTBRP36941 435 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 RBM25P49756 843 aaKnown RBP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 MUM1L1Q5H9M0 696 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 C12orf60Q5U649 245 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 C16orf86Q6ZW13 317 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 RASGRP2Q7LDG7 609 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 ASCL5Q7RTU5 278 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 RPAP2Q8IXW5 612 aaPredicted RBP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 PRPF38AQ8NAV1 312 aaKnown RBP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 RETREG2Q8NC44 543 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 FBXO22Q8NEZ5 403 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 DHX38Q92620 1227 aaKnown RBP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 COPS5Q92905 334 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 CLDND1Q9NY35 253 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 NAV1Q8NEY1 1877 aa9.96□□□□□ -0.82
SHARPIN-210ENST00000534435 TMEM221A6NGB7 291 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 M0R296 226 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 KRT37O76014 449 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 BAIAP3O94812 1187 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 GTF2F1P35269 517 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 LRRC47Q8N1G4 583 aaKnown RBP9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 CHST13Q8NET6 341 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 SNX21Q969T3 373 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 MRPL38Q96DV4 380 aaKnown RBP9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 CCDC17Q96LX7 622 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 RAD9AQ99638 391 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 RNF146Q9NTX7 359 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 CLIP2Q9UDT6 1046 aa9.95□□□□□ -0.82
SHARPIN-210ENST00000534435 ZDBF2Q9HCK1 2354 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 ZNFX1Q9P2E3 1918 aaKnown RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 COL4A6Q14031 1691 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 H0Y858 1186 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 GOLIM4O00461 696 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 PITPNM1O00562 1244 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 LINC01565O15544 149 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 SEC24BO95487 1268 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 HERC4Q5GLZ8 1057 aaPredicted RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 IQSEC1Q6DN90 963 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 BANK1Q8NDB2 785 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 OR6J1Q8NGC5 347 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 EDAQ92838 391 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 ATOH1Q92858 354 aaPredicted RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 WNT8BQ93098 351 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 PABPC5Q96DU9 382 aaKnown RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 DNAJC2Q99543 621 aaKnown RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 MTG1Q9BT17 334 aaPredicted RBP9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 ACAD9Q9H845 621 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 TLR9Q9NR96 1032 aa9.94□□□□□ -0.82
SHARPIN-210ENST00000534435 FBXO40Q9UH90 709 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms