RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 TSPY1Q01534 308 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 CCDC80Q76M96 950 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TRPC5Q9UL62 973 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 GGCXP38435 758 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TMEM154Q6P9G4 183 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 IFT122Q9HBG6 1241 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 LRRIQ3A6PVS8 624 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 E9PMD0 336 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 ENC1O14682 589 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 TNFAIP3P21580 790 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 NXNQ6DKJ4 435 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 C2CD5Q86YS7 1000 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 RICTORQ6R327 1708 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 H7C1D1 291 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 ESRRAP11474 423 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 KRT3P12035 628 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 MRPS35P82673 323 aaKnown RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 POSTNQ15063 836 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 DCAF17Q5H9S7 520 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 NUDCD1Q96RS6 583 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 KRT12Q99456 494 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 FGFR1OP2Q9NVK5 253 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 MAPK8IP1Q9UQF2 711 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 H0YIN7 160 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 SH3BP5O60239 455 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 DCTN3O75935 186 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 ZRANB2O95218 330 aaKnown RBP eCLIP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 WTAPQ15007 396 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 SPOUT1Q5T280 376 aaKnown RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 ARHGAP22Q7Z5H3 698 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 APLFQ8IW19 511 aaPredicted RBP8.54□□□□□ -1.04
CSRP1-218ENST00000533402 ANKRD44Q8N8A2 993 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 SH3GL1Q99961 368 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 C10orf88Q9H8K7 445 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 AMFRQ9UKV5 643 aa8.54□□□□□ -1.04
CSRP1-218ENST00000533402 GMNCA6NCL1 334 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 HEXIM1O94992 359 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CHMLP26374 656 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 SESTD1Q86VW0 696 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 GLT8D2Q9H1C3 349 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NOVA2Q9UNW9 492 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 MAP2P11137 1827 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 OLFML1Q6UWY5 402 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NANOGNBQ7Z5D8 188 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 GYG2O15488 501 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 ESRRBO95718 433 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 KRT5P13647 590 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 PAPOLAP51003 745 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 STRN3Q13033 797 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 MMEL1Q495T6 779 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 EMBQ6PCB8 327 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CCDC84Q86UT8 332 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 STK24Q9Y6E0 443 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 TRAF5O00463 557 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 ADCY3O60266 1144 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 PKP1Q13835 747 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 BEND6Q5SZJ8 279 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 PAPOLBQ9NRJ5 636 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 TYW1Q9NV66 732 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 EPN1Q9Y6I3 576 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CEP55Q53EZ4 464 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NLRP14Q86W24 1093 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CSADQ9Y600 493 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 MYO3AQ8NEV4 1616 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NBPF26B4DH59 902 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 KCNA3P22001 575 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 SLC20A2Q08357 652 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 SFMBT2Q5VUG0 894 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 NBPF15Q8N660 670 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 DDIT3P35638 169 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 RPS6KA2Q15349 733 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 SNX29Q8TEQ0 813 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 THAP11Q96EK4 314 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 POLR3CQ9BUI4 534 aaPredicted RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
CSRP1-218ENST00000533402 CHMP2BQ9UQN3 213 aa8.53□□□□□ -1.04
CSRP1-218ENST00000533402 PLEKHG2Q9H7P9 1386 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 APOA1P02647 267 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 ABCD1P33897 745 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 C2orf54Q08AI8 447 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 INAQ16352 499 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 TMTC2Q8N394 836 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 TEKT4Q8WW24 435 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 PAWRQ96IZ0 340 aaKnown RBP8.52□□□□□ -1.04
CSRP1-218ENST00000533402 ZKSCAN3Q9BRR0 538 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.04
CSRP1-218ENST00000533402 ANTXR1Q9H6X2 564 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms