RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
CSRP1-217ENST00000533188 PFASO15067 1338 aa16.85■□□□□ 0.29
CSRP1-217ENST00000533188 ABCB11O95342 1321 aa16.85■□□□□ 0.29
CSRP1-217ENST00000533188 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSRP1-217ENST00000533188 OLFML2BQ68BL8 750 aa16.84■□□□□ 0.29
CSRP1-217ENST00000533188 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
CSRP1-217ENST00000533188 CCDC82Q8N4S0 544 aa16.84■□□□□ 0.29
CSRP1-217ENST00000533188 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
CSRP1-217ENST00000533188 AMNQ9BXJ7 453 aa16.84■□□□□ 0.29
CSRP1-217ENST00000533188 NR2E3Q9Y5X4 410 aa16.84■□□□□ 0.29
CSRP1-217ENST00000533188 PNMA6FA0A0J9YX94 578 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 OPLAHO14841 1288 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 EVI5O60447 810 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 GNAQP50148 359 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 RCAN1P53805 252 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 FUT2Q10981 343 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
CSRP1-217ENST00000533188 SLC5A4Q9NY91 659 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 PNMA2Q9UL42 364 aa16.83■□□□□ 0.28
CSRP1-217ENST00000533188 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.28
CSRP1-217ENST00000533188 SOWAHBA6NEL2 793 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 COL6A1P12109 1028 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 EVCP57679 992 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
CSRP1-217ENST00000533188 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 RRP36Q96EU6 259 aaKnown RBP16.82■□□□□ 0.28
CSRP1-217ENST00000533188 KIF2CQ99661 725 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 NCOA5Q9HCD5 579 aaKnown RBP16.82■□□□□ 0.28
CSRP1-217ENST00000533188 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
CSRP1-217ENST00000533188 CYBAP13498 195 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 CALML3P27482 149 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 ADD1P35611 737 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 AK2P54819 239 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 RNF207Q6ZRF8 634 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 TBC1D5Q92609 795 aa16.81■□□□□ 0.28
CSRP1-217ENST00000533188 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 DIS3Q9Y2L1 958 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 MRPL11Q9Y3B7 192 aaKnown RBP16.81■□□□□ 0.28
CSRP1-217ENST00000533188 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
CSRP1-217ENST00000533188 RPS6P62753 249 aaKnown RBP16.8■□□□□ 0.28
CSRP1-217ENST00000533188 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
CSRP1-217ENST00000533188 STK3Q13188 491 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 PRAMEF19Q5SWL8 479 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 GPKOWQ92917 476 aaPredicted RBP eCLIP16.8■□□□□ 0.28
CSRP1-217ENST00000533188 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 C11orf49Q9H6J7 331 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 KIAA1217Q5T5P2 1943 aa16.8■□□□□ 0.28
CSRP1-217ENST00000533188 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
CSRP1-217ENST00000533188 NEK4P51957 841 aa16.79■□□□□ 0.28
CSRP1-217ENST00000533188 ARMCX2Q7L311 632 aa16.79■□□□□ 0.28
CSRP1-217ENST00000533188 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
CSRP1-217ENST00000533188 TPCN1Q9ULQ1 816 aa16.79■□□□□ 0.28
CSRP1-217ENST00000533188 LARGE1O95461 756 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 CFBP00751 764 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
CSRP1-217ENST00000533188 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
CSRP1-217ENST00000533188 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 C7orf61Q8IZ16 206 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 PHKBQ93100 1093 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 ZNF274Q96GC6 653 aaPredicted RBP16.78■□□□□ 0.28
CSRP1-217ENST00000533188 GDF15Q99988 308 aa16.78■□□□□ 0.28
CSRP1-217ENST00000533188 ALDH8A1Q9H2A2 487 aaPredicted RBP16.78■□□□□ 0.28
CSRP1-217ENST00000533188 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 SNAI1O95863 264 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 HSD17B4P51659 736 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 GHRHRQ02643 423 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 NTRK3Q16288 839 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 TYW1BQ6NUM6 668 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 MSL3Q8N5Y2 521 aaKnown RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 SYTL5Q8TDW5 730 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 BACH2Q9BYV9 841 aa16.77■□□□□ 0.28
CSRP1-217ENST00000533188 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 V9GY48 417 aaPredicted RBP16.77■□□□□ 0.28
CSRP1-217ENST00000533188 DTNBO60941 627 aa16.76■□□□□ 0.27
CSRP1-217ENST00000533188 CNGA1P29973 690 aa16.76■□□□□ 0.27
CSRP1-217ENST00000533188 SCRN1Q12765 414 aa16.76■□□□□ 0.27
CSRP1-217ENST00000533188 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
CSRP1-217ENST00000533188 KATNBL1Q9H079 304 aa16.76■□□□□ 0.27
CSRP1-217ENST00000533188 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
CSRP1-217ENST00000533188 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms