RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 TTC28Q96AY4 2481 aa20.24■□□□□ 0.83
CTSB-226ENST00000532656 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 ALX1Q15699 326 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 BTNL9Q6UXG8 535 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 SCLYQ96I15 445 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 HELLSQ9NRZ9 838 aa20.23■□□□□ 0.83
CTSB-226ENST00000532656 YBX2Q9Y2T7 364 aaKnown RBP20.23■□□□□ 0.83
CTSB-226ENST00000532656 A0A0D9SFI3 127 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 FGRP09769 529 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
CTSB-226ENST00000532656 ADGRE1Q14246 886 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 DUSP28Q4G0W2 176 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 SLC30A10Q6XR72 485 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 SEZ6LQ9BYH1 1024 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 WDR11Q9BZH6 1224 aa20.22■□□□□ 0.83
CTSB-226ENST00000532656 ALDH8A1Q9H2A2 487 aaPredicted RBP20.22■□□□□ 0.83
CTSB-226ENST00000532656 ADD3Q9UEY8 706 aaKnown RBP20.22■□□□□ 0.83
CTSB-226ENST00000532656 FGAP02671 866 aa20.21■□□□□ 0.83
CTSB-226ENST00000532656 IGFBP4P22692 258 aa20.21■□□□□ 0.83
CTSB-226ENST00000532656 CALML3P27482 149 aa20.21■□□□□ 0.83
CTSB-226ENST00000532656 CCDC85BQ15834 202 aaPredicted RBP20.21■□□□□ 0.83
CTSB-226ENST00000532656 SLC28A3Q9HAS3 691 aa20.21■□□□□ 0.83
CTSB-226ENST00000532656 CHD7Q9P2D1 2997 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 MYL3P08590 195 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 RABGGTBP53611 331 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 PDE1AP54750 535 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 HAND2P61296 217 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 AKNAD1Q5T1N1 836 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 TRMT13Q9NUP7 481 aaKnown RBP20.2■□□□□ 0.82
CTSB-226ENST00000532656 POLR3EQ9NVU0 708 aa20.2■□□□□ 0.82
CTSB-226ENST00000532656 ZBBXA8MT70 800 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 PDHBP11177 359 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 CYP2C9P11712 490 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
CTSB-226ENST00000532656 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
CTSB-226ENST00000532656 RPUSD2Q8IZ73 545 aaKnown RBP20.19■□□□□ 0.82
CTSB-226ENST00000532656 OR6J1Q8NGC5 347 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 CLEC4DQ8WXI8 215 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 VWCEQ96DN2 955 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 SLC4A7Q9Y6M7 1214 aa20.19■□□□□ 0.82
CTSB-226ENST00000532656 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
CTSB-226ENST00000532656 MYOGP15173 224 aa20.18■□□□□ 0.82
CTSB-226ENST00000532656 CPT1AP50416 773 aa20.18■□□□□ 0.82
CTSB-226ENST00000532656 RNF207Q6ZRF8 634 aa20.18■□□□□ 0.82
CTSB-226ENST00000532656 THEGQ9P2T0 379 aa20.18■□□□□ 0.82
CTSB-226ENST00000532656 TNKSO95271 1327 aa20.18■□□□□ 0.82
CTSB-226ENST00000532656 LOC102724159A0A0B4J2E5 919 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 RBM47A0AV96 593 aaKnown RBP20.17■□□□□ 0.82
CTSB-226ENST00000532656 SUPT20HL2P0C7V6 817 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 RRP1P56182 461 aaKnown RBP20.17■□□□□ 0.82
CTSB-226ENST00000532656 PDE4DQ08499 809 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 ZNF543Q08ER8 600 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 NMIQ13287 307 aaPredicted RBP20.17■□□□□ 0.82
CTSB-226ENST00000532656 PWP2Q15269 919 aaKnown RBP20.17■□□□□ 0.82
CTSB-226ENST00000532656 FAM47CQ5HY64 1035 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
CTSB-226ENST00000532656 SCN5AQ14524 2016 aa20.17■□□□□ 0.82
CTSB-226ENST00000532656 RPS6P62753 249 aaKnown RBP20.16■□□□□ 0.82
CTSB-226ENST00000532656 TTLL4Q14679 1199 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 PPP2R2DQ66LE6 453 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 TBC1D10CQ8IV04 446 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 ATXN2LQ8WWM7 1075 aaKnown RBP20.16■□□□□ 0.82
CTSB-226ENST00000532656 COPS5Q92905 334 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
CTSB-226ENST00000532656 ZMYM6O95789 1325 aa20.16■□□□□ 0.82
CTSB-226ENST00000532656 TNFRSF10AO00220 468 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 ATP2A2P16615 1042 aaKnown RBP20.15■□□□□ 0.82
CTSB-226ENST00000532656 USH1GQ495M9 461 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 PCDHA11Q9Y5I1 949 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 RAD50Q92878 1312 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 SCN10AQ9Y5Y9 1956 aa20.15■□□□□ 0.82
CTSB-226ENST00000532656 WDR19Q8NEZ3 1342 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 GOLGA8HP0CJ92 632 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 EDNRBP24530 442 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 BRDTQ58F21 947 aaPredicted RBP20.14■□□□□ 0.81
CTSB-226ENST00000532656 MICALL1Q8N3F8 863 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 SCFD2Q8WU76 684 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 TTC14Q96N46 770 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 ASB2Q96Q27 587 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 ZKSCAN3Q9BRR0 538 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 CPVLQ9H3G5 476 aa20.14■□□□□ 0.81
CTSB-226ENST00000532656 REV3LO60673 3130 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 NEDD4P46934 1319 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 NKRFO15226 690 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■■□□□ 14
CTSB-226ENST00000532656 PFKMP08237 780 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 SNHG28P0DPA3 235 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms