RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 P2RX7Q99572 595 aaKnown RBP14.47□□□□□ -0.09
COPB1-208ENST00000532088 MAF1Q9H063 256 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 RABGAP1Q9Y3P9 1069 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 ADGRA2Q96PE1 1338 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 CA12O43570 354 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 DEXIO95424 95 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 COPB2P35606 906 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
COPB1-208ENST00000532088 GRM1Q13255 1194 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 TAF1CQ15572 869 aaPredicted RBP14.46□□□□□ -0.09
COPB1-208ENST00000532088 CDC37Q16543 378 aaPredicted RBP14.46□□□□□ -0.09
COPB1-208ENST00000532088 WASF1Q92558 559 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 ZIC5Q96T25 663 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 SAGE1Q9NXZ1 904 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 MORF4L1Q9UBU8 362 aa14.46□□□□□ -0.09
COPB1-208ENST00000532088 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
COPB1-208ENST00000532088 RBM19Q9Y4C8 960 aaKnown RBP14.46□□□□□ -0.09
COPB1-208ENST00000532088 PTPDC1A2A3K4 754 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 TLR2O60603 784 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 ICAM1P05362 532 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 PFKFB3Q16875 520 aaPredicted RBP14.45□□□□□ -0.1
COPB1-208ENST00000532088 FAM110CQ1W6H9 321 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 TKFCQ3LXA3 575 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 SMCR8Q8TEV9 937 aaPredicted RBP14.45□□□□□ -0.1
COPB1-208ENST00000532088 PHOX2BQ99453 314 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 AMNQ9BXJ7 453 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 ZNF214Q9UL59 606 aaPredicted RBP14.45□□□□□ -0.1
COPB1-208ENST00000532088 KIF3AQ9Y496 699 aa14.45□□□□□ -0.1
COPB1-208ENST00000532088 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
COPB1-208ENST00000532088 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
COPB1-208ENST00000532088 ZNF536O15090 1300 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 CYP2C8P10632 490 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 SCG2P13521 617 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 MAP2K1Q02750 393 aaPredicted RBP14.44□□□□□ -0.1
COPB1-208ENST00000532088 QRICH1Q2TAL8 776 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 NOM1Q5C9Z4 860 aaKnown RBP14.44□□□□□ -0.1
COPB1-208ENST00000532088 PPP1R18Q6NYC8 613 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 CMTR1Q8N1G2 835 aaKnown RBP14.44□□□□□ -0.1
COPB1-208ENST00000532088 SHCBP1Q8NEM2 672 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 PIGSQ96S52 555 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 SLC26A6Q9BXS9 759 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 TEX13BQ9BXU2 312 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 CPVLQ9H3G5 476 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 SH3GLB2Q9NR46 395 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 RBPJLQ9UBG7 517 aa14.44□□□□□ -0.1
COPB1-208ENST00000532088 SMAPO00193 183 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 CNMDO75829 334 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 SLC25A27O95847 323 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 BCRP11274 1271 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
COPB1-208ENST00000532088 CCNA1P78396 465 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 PKN1Q16512 942 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 C17orf99Q6UX52 265 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 FBXO11Q86XK2 927 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 CCDC82Q8N4S0 544 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 SAMD3Q8N6K7 520 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 PHKBQ93100 1093 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 VAT1LQ9HCJ6 419 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 BARHL2Q9NY43 387 aa14.43□□□□□ -0.1
COPB1-208ENST00000532088 ORC3Q9UBD5 711 aaPredicted RBP14.43□□□□□ -0.1
COPB1-208ENST00000532088 ABCB11O95342 1321 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 FDPSP14324 419 aaKnown RBP14.42□□□□□ -0.1
COPB1-208ENST00000532088 XBP1P17861 261 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 STAT3P40763 770 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 ERVK-9P63128 1117 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 ERVK-24P63145 666 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 CRHR2Q13324 411 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 AMHR2Q16671 573 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 LAPTM4BQ86VI4 370 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 HOMER1Q86YM7 354 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 RIOX2Q8IUF8 465 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 CHST13Q8NET6 341 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 GPRC5AQ8NFJ5 357 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
COPB1-208ENST00000532088 SPATC1LQ9H0A9 340 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 BTBD7Q9P203 1132 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
COPB1-208ENST00000532088 ESYT2A0FGR8 921 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 JAK2O60674 1132 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 GHRHRQ02643 423 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 CWC22Q9HCG8 908 aaKnown RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 RAVER2Q9HCJ3 691 aaKnown RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 TXNRD2Q9NNW7 524 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 MAP3K20Q9NYL2 800 aaKnown RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 FBXO40Q9UH90 709 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 SEPT9Q9UHD8 586 aaPredicted RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 CCPG1Q9ULG6 757 aa14.41□□□□□ -0.1
COPB1-208ENST00000532088 MRPL11Q9Y3B7 192 aaKnown RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 COL11A1P12107 1806 aaPredicted RBP14.41□□□□□ -0.1
COPB1-208ENST00000532088 PPP1R11O60927 126 aaPredicted RBP14.4□□□□□ -0.1
COPB1-208ENST00000532088 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
COPB1-208ENST00000532088 GJB2P29033 226 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms